Candidatus Nitrosopelagicus brevis: T478_0615
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Entry
T478_0615 CDS
T03537
Name
(GenBank) TIM-barrel protein, nifR3 family
KO
K05540
tRNA-dihydrouridine synthase B [EC:1.-.-.-]
Organism
nbv
Candidatus Nitrosopelagicus brevis
Brite
KEGG Orthology (KO) [BR:
nbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nbv03016
]
T478_0615
Transfer RNA biogenesis [BR:
nbv03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
T478_0615
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GFIT
Motif
Pfam:
Dus
DHO_dh
Oxidored_FMN
NanE
SOR_SNZ
His_biosynth
TMP-TENI
Motif
Other DBs
NCBI-ProteinID:
AJA92653
UniProt:
A0A0A7V1D8
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All DBs
Position
507338..508303
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AA seq
321 aa
AA seq
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MAQLPNFTSKVFLAPMAGVSDPALRIMCKKMGAGLVVTELTSVNAIVAKHEQLESQSKNI
TEFIEFSEKERPLSVQLFGSDIAALEKAAKIVEPHFDMIDYNMGCPAPHITKQMAGGALL
QNADLTRQIFRTLVNAVKKPISLKMRIGVTEENNSLFLDIAKIAEQEGIGMMTLHPRTVS
QGYSGHADWDMIKKLKQNVSVPVVGNGDITSPEIAKKVLDYTECDYLMIGRGAMGNPFIF
EQINDYLESGVYKKYTLTDRLEAFVTYLELTEKYHIRFANIKQQAIRFTKGTVGGGQLRN
RLSAATNTDDLKELLLQKVTV
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggcccaacttccaaacttcacaagcaaggttttcttggctcctatggccggagttagt
gatcctgcgttacgtataatgtgtaaaaaaatgggtgcaggtcttgtcgtaactgaactt
actagcgttaatgctattgttgcaaaacatgaacagctagaatctcaatcaaaaaatata
actgaatttattgaattttctgaaaaagaacgtccactatctgttcaattatttggctct
gatattgcggcattagaaaaggcagcaaaaatcgttgaacctcattttgatatgattgat
tataacatgggttgtcctgccccacatattacaaaacaaatggcaggtggtgcattatta
caaaatgcagatttaacacgtcaaatatttcgcactcttgttaatgctgtaaaaaaacca
atttcattaaaaatgagaattggtgttactgaggaaaacaattcactctttttagacatt
gcaaaaattgcagaacaagaagggattggaatgatgacattgcatcctcgaactgtatct
caaggatattctggtcatgctgattgggatatgattaaaaagttgaaacaaaatgtttct
gtacctgttgttggaaatggtgatatcacttctcctgaaattgcaaaaaaggttctagat
tacaccgaatgtgattatctcatgattggtagaggtgcgatgggtaatccatttattttt
gaacaaattaatgactatcttgaaagtggagtatacaaaaaatacaccctgactgataga
ctggaagcatttgttacgtatcttgaacttacagaaaaatatcatattagatttgcaaac
atcaaacaacaggcgatacgatttacaaaaggaactgttggtggtggacaacttcgcaat
agacttagtgctgcaacaaacactgatgatctaaaagaattgcttttgcaaaaagtgact
gtttaa
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