Candidatus Nitrosopelagicus brevis: T478_0640
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Entry
T478_0640 CDS
T03537
Name
(GenBank) cytidine and deoxycytidylate deaminase zinc-binding region
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
nbv
Candidatus Nitrosopelagicus brevis
Pathway
nbv00240
Pyrimidine metabolism
nbv01100
Metabolic pathways
nbv01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
nbv00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
T478_0640
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
nbv02044
]
T478_0640
Enzymes [BR:
nbv01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
T478_0640
Secretion system [BR:
nbv02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
T478_0640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Motif
Other DBs
NCBI-ProteinID:
AJA92307
UniProt:
A0A0A7UZU1
LinkDB
All DBs
Position
complement(529280..529798)
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AA seq
172 aa
AA seq
DB search
MSDNFERPSWDEYFMLQAKLASLRSNCMTRSVGAVIVRDHRQLATGYNGTPPGITNCFEG
GCQRCKDRMDGKTKSGVGLDRCLCNHAEANAIMHCAILGIEAGVKGAVLYSTYVPCLECT
KMAITIGIKKFVCLDEYPETDYNLIKEAGVEIEIIDKTKIERWAKNMITPKE
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaattttgagagaccgagttgggatgaatattttatgcttcaagcaaaactc
gcatcattaaggtcaaactgtatgacaagaagtgtaggggcagtcatagttagagaccac
agacaactagcaacaggatataatggaaccccaccaggaattacgaattgttttgaagga
ggatgccaaagatgtaaagacagaatggatggaaaaacaaaatcaggtgttggtttagac
agatgtttgtgtaatcatgcagaggctaatgccataatgcattgtgcaattttaggtatt
gaggcaggagtaaaaggtgcagttttgtattcaacatacgttccatgtttggaatgcaca
aaaatggcaattacaataggaattaaaaaatttgtgtgcttagatgaatacccagaaact
gattataatttaattaaagaagccggtgttgaaattgagattattgataaaactaagatt
gagagatgggctaaaaatatgattaccccaaaagagtag
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