Candidatus Nitrosopelagicus brevis: T478_0710
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Entry
T478_0710 CDS
T03537
Name
(GenBank) PF01868 domain protein
KO
K03538
ribonuclease P protein subunit POP4 [EC:
3.1.26.5
]
Organism
nbv
Candidatus Nitrosopelagicus brevis
Pathway
nbv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nbv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
T478_0710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nbv03009
]
T478_0710
03016 Transfer RNA biogenesis [BR:
nbv03016
]
T478_0710
03029 Mitochondrial biogenesis [BR:
nbv03029
]
T478_0710
Enzymes [BR:
nbv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
T478_0710
Ribosome biogenesis [BR:
nbv03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
T478_0710
Transfer RNA biogenesis [BR:
nbv03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
T478_0710
Mitochondrial biogenesis [BR:
nbv03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
T478_0710
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_P-MRP_p29
DHQS_2nd
Phage_VG64
Motif
Other DBs
NCBI-ProteinID:
AJA92543
UniProt:
A0A0A7V107
LinkDB
All DBs
Position
complement(582647..582904)
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AA seq
85 aa
AA seq
DB search
MNLVTKSEFDLIGQEVVISDSKNKEIVGIKGKITMETKNMFVINTENGKKNIPKNICQLS
NNDGIIETDSTKLNKRPYERLEMLA
NT seq
258 nt
NT seq
+upstream
nt +downstream
nt
atgaacctagttacaaaatctgagtttgatctaattggacaagaagtagtaatatctgat
tcaaaaaataaagaaatcgttggaattaaaggaaaaattactatggagacaaaaaatatg
tttgtgattaatacagagaacggaaagaaaaatattccaaagaacatatgccaattaagc
aataatgatggaataattgaaactgattcaaccaaattaaacaaaagaccatacgaaaga
ttggagatgttagcatga
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