Candidatus Nitrosopelagicus brevis: T478_0783
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Entry
T478_0783 CDS
T03537
Symbol
prf1
Name
(GenBank) peptide chain release factor 1, archaeal and eukaryotic forms
KO
K03265
peptide chain release factor subunit 1
Organism
nbv
Candidatus Nitrosopelagicus brevis
Pathway
nbv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nbv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
T478_0783 (prf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nbv03019
]
T478_0783 (prf1)
03012 Translation factors [BR:
nbv03012
]
T478_0783 (prf1)
Messenger RNA biogenesis [BR:
nbv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
T478_0783 (prf1)
Translation factors [BR:
nbv03012
]
Eukaryotic type
Release factors
T478_0783 (prf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_1
eRF1_3
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Nairovirus_Gn
MIF4G_like_2
Motif
Other DBs
NCBI-ProteinID:
AJA92564
UniProt:
A0A0A7V0K6
LinkDB
All DBs
Position
635064..636341
Genome browser
AA seq
425 aa
AA seq
DB search
MGKFEVQNVDSVKMYKIRKTLEELTQQSGRGTELITVYIPKGQQLHEVMTQLREEQGTAD
NIKSDLTRTHVVDSLSKVQQRLKLYKKTPEKGLVVFCGALPREGGGPPGSEVVKIYEIEP
PKDLTTSLYRCDDHFHTDILKDMLQDDNIIGLLAIDAKDAGWGLLHGDKLEVLKETGSGV
AGKHRQGGQSAKRFQKLREMELQYYFNRVAHITREYFIDIYKVKGLIVSGPGPTKEDFIK
NEYLEYRLQNNIIATIDASYSGSEGIREAFAKCSDILSNFRMVEEKKIIEKLFQEINTNS
GLGSYGLKEVIEMLRNNIAAMVVISDNINMSRIEKKCKRCSHVEEELIEQGKRIARKTEM
KSQKCSECEAMDFEMTDQDLIDFIALIASQTGTKVEVVSGKTEHGVMLGSLGNIAAILRY
NPNRG
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaatttgaagttcagaatgttgattctgtaaaaatgtataaaattagaaaaaca
ttagaagagttaactcaacaatcaggtcgtggtaccgaactaattacagtatacattcca
aagggtcaacaactacatgaagtcatgacacaattaagagaagaacaaggaactgcagac
aatattaaatcagatttaaccagaacccatgtagtagattcgttatctaaagtacaacaa
agattgaaactatacaaaaaaacaccagaaaaaggattagtggtattctgcggtgcactt
ccaagagaaggaggaggtccgccagggagcgaagttgtaaaaatttacgagattgaacct
cctaaagatttaaccacatcactatacagatgtgatgatcattttcatacagatattttg
aaagatatgttacaagacgataacataattggattgttagcaattgatgcaaaagatgcg
ggttggggattattacatggagataaattggaagttctaaaagaaactggttctggagtt
gcaggtaaacatagacaaggtggacagtctgccaagagatttcaaaaattaagagaaatg
gaattacaatattactttaatagagttgcacatatcaccagagaatatttcattgatatt
tacaaagtaaagggattgattgtttctggacctggcccaactaaagaggattttatcaag
aatgaatacttggaatatagattacaaaataacattattgccacaatagatgcatcatat
tcaggttctgaaggaattagagaagcatttgcaaaatgctcagacatcttatcaaacttc
agaatggtcgaagaaaaaaagataattgaaaaactctttcaagaaatcaatacaaattca
ggattaggaagttatggtcttaaagaagtaattgaaatgttaagaaacaatattgcagca
atggtggttatttctgataacataaacatgagtcgaatcgagaaaaaatgtaaaagatgt
tcacatgtagaagaagagcttattgaacaaggtaaaagaattgcaagaaaaacagaaatg
aagagtcagaaatgttcagaatgtgaagcaatggattttgaaatgactgatcaagatctt
attgactttattgcactaattgcatctcaaacaggaaccaaagtagaagtagtatcagga
aaaacagaacatggagttatgcttggaagtttaggaaatatagctgcaatattgagatat
aatccaaatcgaggttag
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