Candidatus Nitrosopelagicus brevis: T478_0829
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Entry
T478_0829 CDS
T03537
Symbol
fen
Name
(GenBank) flap structure-specific endonuclease
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
nbv
Candidatus Nitrosopelagicus brevis
Pathway
nbv03030
DNA replication
nbv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nbv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
T478_0829 (fen)
03410 Base excision repair
T478_0829 (fen)
03450 Non-homologous end-joining
T478_0829 (fen)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nbv03032
]
T478_0829 (fen)
03400 DNA repair and recombination proteins [BR:
nbv03400
]
T478_0829 (fen)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nbv04147
]
T478_0829 (fen)
DNA replication proteins [BR:
nbv03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
T478_0829 (fen)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
T478_0829 (fen)
DNA repair and recombination proteins [BR:
nbv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
T478_0829 (fen)
Exosome [BR:
nbv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
T478_0829 (fen)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
LTM
Motif
Other DBs
NCBI-ProteinID:
AJA92390
UniProt:
A0A0A7V6T4
LinkDB
All DBs
Position
670328..671350
Genome browser
AA seq
340 aa
AA seq
DB search
MGLDLKPLLVREKTQLESFTNKVVAIDAYNAIYQFLAIIRGPEGLHLTDSQGRVTSHITG
LLFRNINFLTMGIKPVYVFDGKPPSLKSAEIEKRKQIKKEATVKYEKAISAGDMEDARKY
AQQTTSMRDGMVEDSKKLLDLFGIPHIQAPSEGEATAASLTITGQAFASASQDFDSILFG
AKRLVRNFTNSGRRKLPNRNSYIEVLPEMIEFQKNLDSMGLTRQELVDTGILIGTDFNPD
GFERVGPKTAIKMIKQHKRLEDIPQIQEQLEQIPFDQIRKIFLEPEVAKIDKIEFGETDY
EGIVKYLSEERDFSKDRVETSMNRLKKSLEKKSQTLDQFF
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgggattagatctaaaaccattgctagtcagagaaaagacacagcttgaatcatttaca
aacaaagttgttgcaattgatgcatacaatgcaatctatcaatttctagcaataattaga
ggacctgaaggacttcatttaacagattcacaaggaagagtcacaagtcacattacagga
ttgttatttagaaacataaattttctcacaatgggaattaaaccggtctatgtatttgat
ggaaaaccaccttcactaaaatcagcagaaattgaaaagagaaaacagatcaaaaaagag
gctacagtaaaatatgaaaaagcaatttctgcaggagatatggaagatgcaagaaaatat
gcacagcaaaccacatcaatgagagatggaatggttgaagattcaaagaaattattagat
ttatttggaataccacatatacaagcaccatcagaaggagaagcgacagctgcaagtctt
acaattacaggccaagcatttgcttcagcaagtcaagattttgattcaattttatttggt
gcaaaaagattggttagaaattttacaaatagtggaagaagaaaacttccaaatagaaat
tcctacattgaagttttacccgaaatgattgaatttcaaaaaaatctagatagtatggga
ttaacaagacaagaattagtagatacaggaattttaattggaacagatttcaatccagat
ggatttgagagagtaggaccaaaaactgccattaagatgattaaacaacacaagagattg
gaagacattccacaaattcaagagcaattagagcagataccatttgatcaaataagaaaa
attttcctagagccagaggttgccaagatagataaaattgagtttggagaaacagactat
gaaggaatagtaaaatatctatccgaagaacgggatttttcaaaagatagagtagaaaca
tcaatgaatagattgaagaaaagtcttgagaaaaaaagccagactttagatcaattcttt
taa
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