Candidatus Nitrosopelagicus brevis: T478_0879
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Entry
T478_0879 CDS
T03537
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K03652
DNA-3-methyladenine glycosylase [EC:
3.2.2.21
]
Organism
nbv
Candidatus Nitrosopelagicus brevis
Pathway
nbv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nbv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
T478_0879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nbv03400
]
T478_0879
Enzymes [BR:
nbv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
T478_0879
DNA repair and recombination proteins [BR:
nbv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
T478_0879
Prokaryotic type
T478_0879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pur_DNA_glyco
PheRS_DBD3
Phage_cap_E
Motif
Other DBs
NCBI-ProteinID:
AJA92544
UniProt:
A0A0A7V0H9
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All DBs
Position
707618..708184
Genome browser
AA seq
188 aa
AA seq
DB search
MILDKKFYERETVTVAKELIGKTLTRKFKGKKLSGIITETEAYRGKDDLASHAATKMTDR
NKVMFGPVGMSYVYFTYGMYFMLNVVAKSKRQNAGAVLIRGIFPQEGIKTMIRNRGISDL
SKITNGPAKITMAMDISMKENNIDVTKNSIIYISDGIPIKKIKKSPRIGISKAMEKKWNF
SINPKDYF
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgattttagataaaaaattttatgaacgagaaactgtaacagtagcaaaagaactcatt
gggaaaacgttaactagaaaattcaaaggtaaaaaattatcaggaattattacagaaaca
gaagcatatagaggaaaagatgatcttgcaagtcatgcagcaacaaaaatgacagacagg
aataaagtaatgtttggtccagttggcatgtcttacgtctattttacttatggaatgtac
tttatgctaaatgttgtagcaaaaagcaaaagacaaaatgcaggagcggtactaattaga
gggatttttccccaggaaggcattaaaactatgattagaaataggggaattagtgatttg
agtaaaattactaatggaccagcaaaaataacaatggccatggatatttcaatgaaagaa
aataatatcgacgtaacaaaaaattcaattatttacattagtgacggaataccaataaaa
aaaattaagaaatcaccaagaattggaatttcaaaagcaatggagaaaaaatggaatttc
agtattaacccaaaagattatttttga
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