Candidatus Nitrosopelagicus brevis: T478_0883
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Entry
T478_0883 CDS
T03537
Name
(GenBank) oligopeptide/dipeptide transporter, C-terminal domain protein
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
nbv
Candidatus Nitrosopelagicus brevis
Pathway
nbv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nbv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
T478_0883
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nbv02000
]
T478_0883
Transporters [BR:
nbv02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
T478_0883
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
PRK
ATP-synt_ab
Motif
Other DBs
NCBI-ProteinID:
AJA93092
UniProt:
A0A0A7V241
LinkDB
All DBs
Position
complement(710566..711501)
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AA seq
311 aa
AA seq
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MSFISIENLTTRYNTSKGLVHALEDVTFAIDKGESIGIAGESACGKSTLGLSIIQMISNG
KIYSGKIQFDGQSLLDIPDDEFDKKIRWKEISMVFQGAMSSLDPVFSIQEQFDEVLKQHN
FEGDSKQSIIQSLNSVNLDESVLKKFPHELSGGMKQRVIIAMALILKPKFVIADEPTTAL
DVLIQAQIVNLFKKLKKDGQSFMIISHDLAVLSEVAEKIGIMYGGRMVEFGDSEEIFLEP
KHPYTKGLLESIPVLSKDTKPKFIPGIPPNLVNPSEGCKFYDRCPEAMEKCKKDPPKIKT
KTGYVSCWLYE
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgagttttatttcaattgaaaatctcactactcgttataacacctcaaaagggctagtt
catgcattagaagatgtaacctttgcaatcgataaaggagaatcaattggaattgcaggt
gaaagtgcatgcggaaaaagtactcttgggttatctataatccagatgatttcaaatgga
aaaatctattctggaaaaattcaattcgatgggcagtcattgcttgatattcctgatgat
gaatttgataaaaaaattagatggaaggaaatttctatggtatttcaaggcgcaatgagt
tctcttgatcctgtattttctatccaagaacaatttgatgaagtcttaaaacagcataat
tttgaaggtgattcaaaacaatctattattcaatcattaaattctgtaaatcttgatgaa
tctgttctaaagaaatttccacatgaattgagtggaggaatgaaacaaagagtaattatt
gctatggcattgattctaaaaccaaaatttgtaattgctgatgaacctacgactgcactt
gatgtcttaattcaagctcaaattgttaatttgtttaaaaaattaaaaaaagatggccag
tcctttatgatcatctcccatgatttagctgtactatctgaggttgcagagaaaattgga
attatgtatggaggaagaatggttgaatttggtgattctgaagaaatttttcttgaacca
aaacatccttacacgaaaggtctgttagaatcaattccagttttatctaaagacacaaaa
ccaaaatttattcctggaattcctccaaatctggtaaacccttctgaaggttgcaaattt
tatgatagatgccctgaagcaatggagaaatgtaaaaaagatccgccaaaaattaaaaca
aaaaccggttatgtttcatgctggctttacgagtag
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