Candidatus Nitrosopelagicus brevis: T478_0928
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Entry
T478_0928 CDS
T03537
Name
(GenBank) ribosomal L40e family protein
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
nbv
Candidatus Nitrosopelagicus brevis
Pathway
nbv03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
nbv00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
T478_0928
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
T478_0928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
nbv03011
]
T478_0928
04121 Ubiquitin system [BR:
nbv04121
]
T478_0928
Ribosome [BR:
nbv03011
]
Ribosomal proteins
Eukaryotes
Large subunit
T478_0928
Archaea
T478_0928
Ubiquitin system [BR:
nbv04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
T478_0928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L40e
DZR
Zn_Ribbon_1
HypA
DUF7129
I-TevI_ZnF
DUF7577
CTV_P23
Motif
Other DBs
NCBI-ProteinID:
AJA93213
UniProt:
A0A0A7V2Y4
LinkDB
All DBs
Position
756382..756549
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AA seq
55 aa
AA seq
DB search
MPVADPLKKQIAQKARLHMKICISCGARLDMSATRCRKCRSTQLRLKNRALGIKK
NT seq
168 nt
NT seq
+upstream
nt +downstream
nt
atgccagttgcagatcccctaaaaaaacagattgcacaaaaagcaagacttcatatgaaa
atctgtatttcatgtggtgcaagattagatatgagcgctacaagatgtagaaaatgtcga
agtactcaactaagattgaaaaatagagcactgggaattaaaaagtag
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