Candidatus Nitrosopelagicus brevis: T478_1025
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Entry
T478_1025 CDS
T03537
Symbol
pdxB
Name
(GenBank) 4-phosphoerythronate dehydrogenase
KO
K00058
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:
1.1.1.95
1.1.1.399
]
Organism
nbv
Candidatus Nitrosopelagicus brevis
Pathway
nbv00260
Glycine, serine and threonine metabolism
nbv00270
Cysteine and methionine metabolism
nbv00680
Methane metabolism
nbv01100
Metabolic pathways
nbv01110
Biosynthesis of secondary metabolites
nbv01120
Microbial metabolism in diverse environments
nbv01200
Carbon metabolism
nbv01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
nbv00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
T478_1025 (pdxB)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
T478_1025 (pdxB)
00270 Cysteine and methionine metabolism
T478_1025 (pdxB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nbv04147
]
T478_1025 (pdxB)
Enzymes [BR:
nbv01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.95 phosphoglycerate dehydrogenase
T478_1025 (pdxB)
1.1.1.399 2-oxoglutarate reductase
T478_1025 (pdxB)
Exosome [BR:
nbv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
T478_1025 (pdxB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2-Hacid_dh_C
2-Hacid_dh
NAD_binding_2
LXG
Motif
Other DBs
NCBI-ProteinID:
AJA92920
UniProt:
A0A0A7V8C7
LinkDB
All DBs
Position
complement(837036..837968)
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AA seq
310 aa
AA seq
DB search
MSMNQSVLICDQVNPVLNEILEKNGLQITYEPEITPDQILEKIENFEVIIVRSRTKITKD
MIEKANKCQIIARVGVGLDNIDQTTAKEKNIRVINAVEGAMNAVAELVLGLMLSLAREIP
RADREVRNGNWIKKELMGTELRGKYLGIVGLGNIGKRLGRLARALNMNIIGYDVVPIDEE
FSSEVGLMKADLGTLLASSDYVSLHVPLLDSTKHLINAEKMSTMKNTSRIINTSRGGVID
EEALYEFLKDGKLGGAALDVFEVEPATSNKLASLPNFISTPHMGAQTKEAQSLAANVIAE
KIIQILRGVT
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgaatcaatctgtcctgatatgtgatcaagtaaatccggtcttaaatgaaatt
ttagagaaaaatggattacaaattacatacgagcctgaaattactcctgaccaaatttta
gaaaaaattgaaaattttgaagtcatcatagttagaagtagaacaaaaattaccaaagac
atgattgaaaaagcaaacaaatgtcaaattatagctagagttggtgttggtctagataat
attgatcaaacaactgctaaagaaaaaaacattcgtgtaattaatgcagttgaaggtgca
atgaatgctgttgcagaattagttctaggtttaatgttatccttagcaagagaaattcca
agagctgacagggaagtaagaaatggaaattggattaaaaaagaattgatgggtaccgag
ttacgtggaaaatatttgggaattgttggattaggaaatattggaaaaagacttggtcgt
cttgccagagcattaaacatgaatattattggttatgatgtagtcccaattgatgaagaa
ttttcaagtgaggttggattgatgaaagcagatctcggaactctacttgcaagttctgat
tatgtctcattacatgttccattattggacagtacgaaacacttgattaatgctgaaaaa
atgagcacaatgaaaaacacttctcgcataatcaatacatctcgtgggggtgtaatagat
gaggaagcattatacgaatttctaaaggatggtaaactgggaggggctgcattggatgta
tttgaggttgaacctgctacttcaaacaagctggcaagcctaccaaacttcatttctacg
cctcatatgggcgctcagacaaaagaagctcagtctttagctgcaaatgttatagcagaa
aagataatacaaatccttagaggcgttacttag
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