Candidatus Nitrosopelagicus brevis: T478_1097
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Entry
T478_1097 CDS
T03537
Name
(GenBank) hypothetical protein
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
nbv
Candidatus Nitrosopelagicus brevis
Brite
KEGG Orthology (KO) [BR:
nbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nbv03016
]
T478_1097
Enzymes [BR:
nbv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
T478_1097
Transfer RNA biogenesis [BR:
nbv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
T478_1097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_THUMP_arc
STING_LBD
Motif
Other DBs
NCBI-ProteinID:
AJA92137
UniProt:
A0A0A7UZG9
LinkDB
All DBs
Position
complement(902486..903628)
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AA seq
380 aa
AA seq
DB search
MKSHSVTISKILKNYNLCEYCTGRLISKLVGKPSSKSLGKKYLIKYKKTSTTKCYICKNL
FENLDLMLSNIYEKSDDVDFKTFNLGIILKNSFLERDDLIKSKFKLKGIENIKFGVSAEI
IKKLSRRTKSKRIVDNPDLFIQANFKDESCTIRTKPLFVYGRYNKKIRKLPQKQVLCKSC
NGIGCHNCNFDGLETLESVESNISNFLIKKFDGNQVKINWIGGEDQSSLVLGDGRPFFAK
ILNPKRRNRILRKSLKLEDISLSELKKIPIPPKGSIAFKSKVSIIIDTKKSISITQLQKL
DILKNSEIHDAGKNKKNTQKRIYKISYKKLGKTSFRLDLLLDGGIPIKSFIQNSEITPNV
SELLDNQCRCKSLDFKNIIL
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatcacattctgttacaatttctaaaattttaaaaaattataatctttgtgagtat
tgtacgggacgtttaatctcaaagctagttggaaaaccttcatctaaatcacttggaaaa
aaatatctcataaaatacaaaaaaacatctaccacaaaatgctacatatgtaaaaacctc
tttgaaaatcttgatcttatgttatcaaatatttatgaaaaatctgatgatgttgatttt
aaaacattcaatcttgggataattttaaaaaattcatttcttgaaagagatgatttgata
aaatcaaaatttaaactcaaaggaattgaaaatattaaatttggagtttctgctgaaatt
ataaaaaaattatctcgacgaacaaaatctaaaagaattgtagataatcctgatttattc
atacaagcgaatttcaaggatgaatcttgtactattcgaacaaaacctctttttgtttat
ggtagatataataaaaaaatcagaaaattacctcaaaaacaagttttatgcaaaagttgt
aatggaattggttgtcataattgtaattttgatggattggaaactttagagagtgtggaa
agtaacatctctaatttcttaataaaaaaatttgatggaaatcaggttaaaattaattgg
attggtggtgaggatcaatctagtttagttcttggtgatggcaggccattttttgcaaaa
atactaaatccaaaaagacgaaataggatattacgtaaatctttgaaattagaagatatt
tcattatcagaattaaaaaaaattccaataccacctaaaggatcaattgcgtttaaatct
aaagtttcaataattatcgatacaaaaaaatcaatctccataactcaattacaaaaattg
gatattttgaaaaactctgaaatccatgatgctgggaaaaataaaaaaaatacccaaaaa
cgaatctacaaaataagttataaaaaattaggaaaaacctcattccgcttagatttattg
ttagatggcggaataccaatcaaatcattcattcaaaactctgagattacacccaatgtg
tctgaattattagataatcaatgtaggtgtaaaagccttgatttcaaaaacataattctc
taa
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