Candidatus Nitrosopelagicus brevis: T478_1150
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Entry
T478_1150 CDS
T03537
Name
(GenBank) putative metal-binding domain in RNase L inhibitor, RLI
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
nbv
Candidatus Nitrosopelagicus brevis
Brite
KEGG Orthology (KO) [BR:
nbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nbv03009
]
T478_1150
Ribosome biogenesis [BR:
nbv03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
T478_1150
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
Fer4
Fer4_6
Fer4_21
Fer4_7
AAA_21
Fer4_2
Fer4_10
NB-ARC
AAA_15
LdpA_Fe-S-bd
Fer4_16
Fer4_9
Fer4_3
AAA_29
Fer4_4
MMR_HSR1
RsgA_GTPase
RE_XcyI
His_Phos_1
Rad17
Fer4_17
Motif
Other DBs
NCBI-ProteinID:
AJA92797
UniProt:
A0A0A7V176
LinkDB
All DBs
Position
942366..944150
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AA seq
594 aa
AA seq
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MTHRVAVLDKELCQPKKCGLECIKYCPVNKSGADCIVLNEETKKATIDEDICNGCGICVK
VCPFDAITIVNLASELKTDKIHQYGMNSFRLYKLPTPKKGEVVGLLGRNGMGKSTVVNIL
SGILKPNLGNYEQPPEWDEILKYYKGTELKAHFEKIKNGEIKASIKPQQVHTIADAFDGT
GKELLDKFDQRGTSRELVKQLGLENSLEQNLKELSGGELQRLSVATAASRESDFYFFDEP
SSYNDVFQRTGVARVIHGLAEEGKSVMVVEHDLTLLDFLSDYIEVLYGVPAAYGIVSNVL
STKVGINVFLDGYLPTENVRFRDKKFTFDASTSGDEGLEGDAVITYPKLEKKYDSFSVSI
EPGTVRKGELLGIMGANALGKTTMMKMIAGVEKPTDGSVDKKIKISYKPQYLSNDIDVEV
ISVLEKANGSTIEGSAEEEQILDPLKLKKLYNKSVKNLSGGELQKVAIASCLLQKVDLYA
LDEPSAFLDVEDRIAVAKFLQKFVRSFGKSAIIIDHDLQLMDLVSDSMVIFEGTSSVEGI
ATSPMPKTDAMNRFLESLDISFRKDEKTSRHRVNKEASRLDKEQKSSGNYYFRK
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgacacatcgtgttgctgtattggataaggagttatgccaacccaaaaaatgtgggtta
gaatgtatcaaatattgcccggtcaataaatccggggcagattgtattgtactcaacgaa
gaaaccaaaaaggcaaccatagatgaggatatttgtaatggttgtggaatttgtgtcaaa
gtttgtccatttgatgcaattacaatcgtgaatttggctagtgaactaaaaacagacaaa
attcatcagtatggaatgaattcatttagactatacaaattaccaactccaaaaaaaggc
gaagtggtcggattacttggaagaaatggtatggggaaaagtactgtggtcaatattctt
tcaggtattttgaaacctaatttaggaaattatgaacaaccaccagaatgggatgagatt
ttaaaatattacaaaggtacagaactaaaagcacattttgaaaaaataaaaaatggtgag
attaaagcatcgattaaaccacaacaggtacatacaattgcagatgcatttgacggaaca
ggaaaagaacttttagataaatttgatcaaagaggaacctctagagaattagttaaacaa
ttaggattagaaaattctttagaacaaaatctcaaagaactcagtggaggcgaactccaa
agattatcagttgcaactgctgcatcaagagaatcagacttttacttttttgatgaaccg
tcatcttacaatgatgtatttcaaagaacaggagttgcaagagtaattcacggtcttgca
gaagaaggaaaaagcgtgatggtagtagaacatgatctaacattactggactttcttagt
gattatatcgaggtgctatatggtgtgcctgcagcatatggaattgtttcaaatgtatta
tcaaccaaagttggtatcaacgtatttcttgatggttatcttccaactgaaaatgtaaga
tttagagataagaaattcacttttgatgcatcaacatcaggtgatgagggattagagggg
gatgccgtgataacatatccaaagttggaaaagaaatatgattcattttcagtttcaatt
gaaccaggaactgtaagaaaaggagaattacttggaattatgggtgccaatgcattagga
aaaactacaatgatgaaaatgattgcaggtgttgaaaaaccaacagacggttcagttgat
aaaaaaatcaagatttcatacaaaccacaatatctttcaaatgatattgatgtagaggta
atttctgttttagaaaaagcaaatggctctacaatcgaaggaagtgctgaagaagaacag
attttggacccattgaaattaaaaaaattgtataataaatcagtaaaaaatttgtcagga
ggagaactgcaaaaagttgcaatagcatcatgtctactacaaaaagtggatttgtatgcg
ctagacgaaccatcagcatttttagatgtggaagatagaattgcagttgccaaattctta
cagaaatttgtacgctcatttggtaaatctgcaattatcatagaccacgatcttcaattg
atggacctagtctcagattcaatggtgatttttgaaggaacatcaagtgtagaaggaatt
gcaacatccccaatgccaaaaacagatgccatgaatagatttttagaatcacttgacatt
tcatttagaaaagatgagaaaacaagtagacatcgtgttaacaaagaagcaagtagattg
gataaagaacaaaaatcatcaggtaattactactttagaaaatga
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