Candidatus Nitrosopelagicus brevis: T478_1194
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Entry
T478_1194 CDS
T03537
Name
(GenBank) succinate dehydrogenase or fumarate reductase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
nbv
Candidatus Nitrosopelagicus brevis
Pathway
nbv00020
Citrate cycle (TCA cycle)
nbv00190
Oxidative phosphorylation
nbv00650
Butanoate metabolism
nbv00720
Other carbon fixation pathways
nbv01100
Metabolic pathways
nbv01110
Biosynthesis of secondary metabolites
nbv01120
Microbial metabolism in diverse environments
nbv01200
Carbon metabolism
Module
nbv_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
nbv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
T478_1194
00650 Butanoate metabolism
T478_1194
09102 Energy metabolism
00190 Oxidative phosphorylation
T478_1194
00720 Other carbon fixation pathways
T478_1194
Enzymes [BR:
nbv01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
T478_1194
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
HI0933_like
GIDA
Thi4
FAD_oxidored
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AJA92447
UniProt:
A0A0A7V075
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All DBs
Position
complement(978457..980169)
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AA seq
570 aa
AA seq
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MTDSIEFDLIIAGSGLAGLRAAIEAAKKNQKIKIGVIAKTQVMRSHSVSAEGGTAAVIQE
DKGDTIESHIYDTVKGSDFLADQDTAEKLCHMMPNEIFQLEHWGMPWSRQENGKIDQRNF
GGYSFPRATYAIDKVGFFEMQTLYDTCQKFDNIEFLNEWYITSIIHDGKQFCGITAIETS
SGSFYTIKGKALIIATGGAGRIFSYSTYALSSTPDGLDMAYRAGMALKDMEFVQFHPTGI
LPSGILITEGARGEGGYLLNKDGDRFMKNYAAGKMELAPRDIVSRSIMTEINEGRGFKHE
TGEDCMKLDLRHLGDEKIKAKLGGIREISIKFSGIDPADEPIDIRPVCHYMMGGIHTNID
GAAELQGVWAAGEAACNSVHGANRLGANSTSECIVWGKITGSLAVDYIEKEHTSAQFPTH
LVAAEETRIFDGIFRGRGDVNPYEVKQEVAEILNAKAYVYRNHNDLAEGLKKVRELKQKT
WKHVDDSAKEYNTNFQNVMELDSMFRVAEIVLLGAINRKESRGAHSRTDFPTRDDANFLH
HTLAYYDPSEPIMKKHPVTITKYKPVERKY
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgacggattctattgaatttgatctaataattgcaggttctggtttggcaggattacgt
gctgccattgaggctgcaaagaagaatcaaaaaatcaagattggagttattgcaaaaaca
caggtcatgcgttctcattctgtatctgctgaaggtgggactgctgctgtaattcaagaa
gacaagggtgacaccatagaatcgcatatttatgatactgtaaagggaagtgacttttta
gcagaccaagatactgctgaaaaattatgtcacatgatgccaaatgaaattttccaatta
gaacattggggcatgccttggtcaagacaagaaaatgggaaaattgatcaacgtaatttt
ggtggatatagttttccacgtgcaacttatgcaattgataaagttggattctttgaaatg
caaactctatacgatacttgtcaaaaatttgataatattgaatttctaaatgaatggtac
ataacatcaatcatccacgacggaaaacaattttgtggaataactgcaattgaaacatca
tctggttcattttatacaatcaaaggtaaagccttaatcattgcaactggcggcgcagga
agaattttcagttattcgacatatgcgttatcatcaacacctgacggtcttgatatggct
tatcgtgcaggtatggctttgaaagatatggagtttgtacaattccatcctactggaatt
ttaccatctggaattttgattacagaaggtgcacgaggtgaaggtggttacctgctaaac
aaagatggtgaccgattcatgaaaaactatgcagctggaaaaatggaattagcaccacgt
gatattgtttcacgttctattatgactgaaattaatgaaggtcgtggattcaaacatgaa
actggagaggattgtatgaaattagatttacgacatttaggtgatgaaaaaattaaagcc
aaactaggtggtattagagaaatttcaattaaattttcaggaattgatcctgctgatgaa
ccaattgacattagacctgtttgccattacatgatgggtggaatacacacaaacattgac
ggtgcagctgaacttcaaggtgtttgggctgcaggagaagctgcatgtaacagcgttcac
ggcgcaaatcgtctaggtgcaaactctacttctgaatgtattgtttggggaaaaattaca
ggctctttagctgttgattatattgaaaaagaacacacttctgcacaatttcctactcat
ttagtggctgctgaagaaactagaatctttgatggaatattccgtggacgtggagatgtt
aatccatatgaagtaaaacaagaagttgcagaaattctcaatgcaaaagcatacgtctat
agaaatcataatgatttagccgaaggcctcaaaaaagtacgagaactaaagcaaaaaacc
tggaaacatgttgacgattctgctaaagagtataacactaatttccaaaatgtgatggag
ttggattcaatgttccgtgttgctgaaatagtgttattaggtgctataaacagaaaagaa
tctcgtggggctcattctagaactgatttcccaacccgtgatgacgcaaatttccttcac
cacacacttgcatattatgatccaagcgaaccaattatgaagaagcatccagttactata
actaaatacaaacctgtggagagaaaatactga
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