Candidatus Nitrosopelagicus brevis: T478_1217
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Entry
T478_1217 CDS
T03537
Name
(GenBank) DEAD/DEAH box helicase
KO
K03726
ATP-dependent DNA helicase [EC:
5.6.2.4
]
Organism
nbv
Candidatus Nitrosopelagicus brevis
Brite
KEGG Orthology (KO) [BR:
nbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nbv03400
]
T478_1217
Enzymes [BR:
nbv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
T478_1217
DNA repair and recombination proteins [BR:
nbv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
T478_1217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_dom4_arc
Helicase_C
DEXQc_Suv3
HHH_2
HHH_5
HTH_61
T2SSE
Motif
Other DBs
NCBI-ProteinID:
AJA92276
UniProt:
A0A0A7V257
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All DBs
Position
complement(997054..999273)
Genome browser
AA seq
739 aa
AA seq
DB search
MKISKLDLKPEVIDFLTSQGYEKLFEPQEEAVKAGLFDDKKNILVTIPTASGKTLIAMLA
TLSHLSKHKTKVVYLTPLRALTSEKFEEFKKLEKFNLGRKIKVALSTGDSKEKKEKLEDA
DVIFLTNESMDANMAFQQDWIYDIGLVVSDEIHLIGDDTRGPTLEIVLTRLRSGFIGKNP
PRIIGLSATISNSDELADWLDCDLVESTFRRVPLSEAVYSRHIITNQDREETEGNLSNDR
QESRHQKDWIGLGLDTVDDGDQCLIFAMTRKNAVAWAKEAGRDVVKMLNENQKKELEKIS
KKILPKDSYDNTKLTTELAQMVKNGTAFHHAGLDQRCRTIIETEYKNRHIKFLTATPTLA
AGVNLPARRVVIPSVMRYTNNGLEKISILEYKQMCGRAGRPQYDDMGESIIISKGYPDEI
LEHYVDGEPEPLESKTLDEDSSLRINLLGFIFTASKFKPTSYEKIIKFFSQTFAAYQLSN
DSVLEKKITKQLEKLKEYGMITDDNGFEPTKFGIRVFYLRIDPKTAFDMTGYVEDYVRGT
KHTFGILHMITNLPEFYSQFPVPDKYQEDMDDLINKNEKLYTQQKFSDEDCFKSLLILYK
WIDAMTYQDMSEHFDAEPGDIFYIKENAKDLVYTFTEIVKFWRDHAKENEQKKIVSEYQN
LIDESDLLRLQVVHGVPEKYLELVKIKQIGRVRAQILYKNGYKNKTTLKKAPLEKLAAID
KIGMILAKSIKSQVEKKVK
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataagtaaattagatctaaaacctgaagtaattgattttctaacttctcaaggg
tatgaaaaactatttgagccacaagaagaagcagtaaaagctggattatttgacgacaag
aaaaacatcttagtaacaatacctactgcaagtggaaaaacactaattgcaatgttagca
actctttctcatctttcaaaacataagacaaaagttgtttatctaactcctttacgtgcc
ctaaccagtgaaaaatttgaagaatttaaaaaattagagaaatttaatctaggtagaaaa
ataaaagttgcattatccactggagattcaaaagaaaaaaaagagaaacttgaagatgca
gatgtaatatttctcacaaatgaaagtatggatgcaaatatggcatttcaacaagattgg
atctatgatataggtttggtagtctctgatgaaattcatttgattggtgatgatactaga
ggtccaacattagaaattgttctaactagacttagatctggatttattggaaaaaatcca
cctagaataattggactcagtgcaaccatatcgaatagtgatgaattagcggattggtta
gattgcgatttagttgagagtacatttagacgagttccattatctgaagccgtatacagt
agacatatcataacgaaccaagaccgagaagaaactgaaggaaatctctcaaacgatcgt
caggaatctagacatcagaaagattggattggtttaggattggatactgttgatgatgga
gatcaatgtttgatatttgcaatgacacgaaaaaatgctgtagcgtgggcaaaggaggct
ggaagagatgttgtaaaaatgcttaatgaaaaccaaaaaaaagaattagaaaaaatttca
aagaaaattcttccaaaggatagttatgataatacaaaattaactactgaattggcacaa
atggtgaaaaatggtactgcatttcatcatgcaggacttgatcaaagatgtcgtacaata
attgaaactgaatataaaaatagacatataaaatttttaactgcaactcctactttagct
gctggtgtaaatctgcctgcgcgaagagttgtaattccaagtgttatgagatatacaaac
aatggtttagaaaaaattagtattttagaatataaacaaatgtgtggaagagctggtaga
ccccaatatgatgatatgggagaatcaataatcatttcaaaaggatatcctgatgaaata
ttagaacattatgttgatggtgaacctgaaccattagaatcaaaaactttggatgaagat
agttcattaagaattaatttacttggatttatttttacagcatctaaatttaagccaaca
tcttatgaaaaaataattaaattcttttcacaaacttttgctgcataccaactatcaaat
gattctgtgttagaaaaaaagataacaaaacaacttgaaaaattaaaagaatatggaatg
attactgatgacaatggttttgaacctacaaaatttggtattagagttttttatttaaga
attgatccaaaaactgcctttgatatgactggttatgttgaagattatgtaagaggaaca
aaacatacatttggaatattgcatatgattacaaatctcccagaattttattcacagttt
ccagtacctgataaatatcaagaagatatggatgatttaattaataaaaatgaaaaatta
tacacacaacaaaaattttcagacgaggactgcttcaaaagtttgttaattctttacaag
tggattgatgccatgacttaccaagatatgtcagaacactttgatgctgaacctggtgat
atattctatattaaagaaaatgcaaaagatttggtctatacttttactgagattgttaaa
ttttggagagatcacgctaaagaaaatgaacaaaaaaagattgtatctgaataccaaaat
ctcattgacgaatcagatctactcagactacaagtagttcatggtgttccagaaaaatat
cttgaattggtaaaaattaaacaaattggacgagttcgtgctcaaattttatacaaaaat
ggctacaaaaacaaaaccacactcaaaaaagcgcctcttgagaaattagcagcaatagat
aaaattggtatgattcttgcaaaaagtatcaagtctcaagtagaaaaaaaggtcaaataa
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