KEGG   Candidatus Nitrosopelagicus brevis: T478_1220
Entry
T478_1220         CDS       T03537                                 
Name
(GenBank) replication factor C C-terminal domain protein
  KO
K04801  replication factor C small subunit
Organism
nbv  Candidatus Nitrosopelagicus brevis
Pathway
nbv03030  DNA replication
Brite
KEGG Orthology (KO) [BR:nbv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    T478_1220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nbv03032]
    T478_1220
DNA replication proteins [BR:nbv03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     T478_1220
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA Rep_fac_C RuvB_N RCF1-5-like_lid DNAX_ATPase_lid Rad17 AAA_14 AAA_assoc_2 nSTAND3 AAA_16 AAA_2 AAA_3 Mg_chelatase Cdc6_lid MAP DEAD AAA_5 Shikimate_dh_N AAA_19 NB-ARC PTPlike_phytase Ribosomal_S6e Viral_helicase1 HTH_PafC AAA_7
Other DBs
NCBI-ProteinID: AJA92801
UniProt: A0A0A7V3L8
LinkDB
Position
1001978..1002934
AA seq 318 aa
MTISDIMWVEKYRPKKISEIVNQKDIKGSLSALLKNQEEMPHLLFSGSAGVGKTTMALCI
SQEILGDKWKDYTLELNASDERGINMVRERVKKFSRFAGLDTEIPFKIIILDEADEMTSD
AQTALRRIIEDTAKFCRFILIANNISKIINPIQSRCAVFKFSQIDEKEITTHLKAVLKKE
KGKADEKGLKEIAGYAGGDLRHAINLLQTAASTGDITQDSVKAAAGLTKTNDVEDVLKLA
VSGKIQDSRNKMIELVKVYGMSESDFLKYINQALFSAKYDNLEELSQIIAKYDYRILVGS
NPEIQLSAMLAELGKFSK
NT seq 957 nt   +upstreamnt  +downstreamnt
atgacaatttcagatattatgtgggtagagaagtatagaccaaagaaaatctcagaaata
gtcaatcagaaagatatcaaaggtagcctttcagcactactcaaaaatcaagaagagatg
ccacatttacttttttcaggttctgcaggagttggaaagactacgatggcattgtgtatt
tctcaagagattttgggagacaaatggaaagactacacactagagctgaatgcatcagat
gaaagaggaatcaacatggtaagagaaagagtgaaaaaattctcacgatttgcaggacta
gatacagagattccatttaaaataattattttagatgaggcagatgagatgacgtcagat
gctcaaacagcattgagaagaattatagaagacacagcaaaattttgtagatttattttg
attgcaaataacatttcaaaaattatcaatccaattcaaagtagatgtgcagttttcaaa
ttttcacaaattgatgaaaaagagatcaccacacatctaaaagctgtattaaaaaaagaa
aaaggtaaggctgatgaaaaaggtctaaaagaaatcgcaggatatgcaggaggagatctt
agacatgcaatcaatctattacaaaccgctgcaagtacaggagatatcactcaagatagc
gtgaaagcagctgcaggattaacaaaaacaaatgatgtagaagatgttttaaaattagca
gtttctggaaaaattcaagattctagaaacaaaatgattgagctggtcaaagtgtatgga
atgtcagaatcagactttctcaaatatatcaatcaagcattattttctgcaaaatatgat
aatctggaagagttatcacagattatagcaaaatatgattatcgaattttagttggttca
aatccagaaattcaattatcagcaatgctagcagaattaggtaaattttctaaataa

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