Candidatus Nitrosopelagicus brevis: T478_1224
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Entry
T478_1224 CDS
T03537
Symbol
hisS
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
nbv
Candidatus Nitrosopelagicus brevis
Pathway
nbv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nbv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
T478_1224 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nbv01007
]
T478_1224 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nbv03016
]
T478_1224 (hisS)
Enzymes [BR:
nbv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
T478_1224 (hisS)
Amino acid related enzymes [BR:
nbv01007
]
Aminoacyl-tRNA synthetase
Class II (A)
T478_1224 (hisS)
Transfer RNA biogenesis [BR:
nbv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
T478_1224 (hisS)
Prokaryotic type
T478_1224 (hisS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_2d
CTU2
Motif
Other DBs
NCBI-ProteinID:
AJA91968
UniProt:
A0A0A7UZB4
LinkDB
All DBs
Position
complement(1004752..1006023)
Genome browser
AA seq
423 aa
AA seq
DB search
MDLPRGMKDFENMEIQKIEYIRQHFIETANTFGFDLMEPSPIELMSVIEAKSGPTIRDDV
YFFNDKGDREVSLRFDFTIGLTRYIAGQKSMKLPAKISAFGGVWRYDEPQKGRYRFFHQW
DIEIFGKQNTETDAEIIEFTSKFFSNLGLENIVLSISHRKITQSYISSIFESENSEVISD
ILRAIDKIQKKSEQEIISEYEKKGYSKEKLEKIIEFSKLKGSPDEISKKFDVTQFENWTE
LTSLFESLKNRNVNNIQIDFGIVRGLDYYSGIVFEAFDKNFDIGALVGGGRYDNLPSVFG
RDDLGATGVAGGVERIILALENQNSSFLQKTNRISVLYVNEDVKSNAMTIASILRENSIP
TDIDLSGRALKKQMEQSTNSKFVIIVGPDELSKNMVVVRNMSDRTENKILISELLEHVKK
LLM
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggatctaccaagaggaatgaaagattttgaaaatatggaaattcaaaaaattgaatat
atccgacaacattttattgaaactgccaatacttttggatttgatttaatggaaccatct
ccaattgaattgatgtcagttatagaagcaaaaagtggacctacaattcgtgatgatgtt
tattttttcaatgataaaggagaccgagaagtttcattaagatttgattttacaattggt
ctaacacgatatattgctggacaaaaatcaatgaaacttccagcaaaaatctctgcgttt
ggaggagtgtggcgatatgatgaaccacagaaaggaagatatcgatttttccatcaatgg
gatattgaaatatttggaaaacaaaatactgaaactgatgcagaaattattgagtttacc
tcaaaatttttctcaaatcttggtcttgaaaacatagttcttagtatctcgcacagaaaa
atcactcaatcatacatctcatcaatttttgaatctgaaaattccgaggttatttcagat
attcttcgtgctatagataaaattcagaaaaaatctgaacaggaaatcatatctgaatat
gaaaaaaagggatattctaaagaaaaattagaaaaaataatagaattttcaaaattgaaa
ggatctccagatgaaatatctaaaaaattcgatgtaacacaatttgaaaactggactgaa
cttacatctctttttgaatcgttaaaaaatcgcaatgtaaataatattcaaattgatttt
ggaattgttcgtggtcttgattattattcaggaatagtttttgaggcttttgataaaaac
ttcgatattggtgcattagtcggtggtggaagatatgataatttgccatctgtttttggt
agagatgatcttggcgctacaggtgttgcaggtggtgttgaaaggataatacttgctttg
gaaaatcaaaattcatcattcttacaaaaaactaatcgtatttctgttttgtatgtaaat
gaagatgtgaaatcaaatgccatgacgattgcatctatcttaagagagaattctatcccc
actgatattgatctatctggtcgagcattaaaaaaacaaatggaacaatcaacaaactca
aaatttgttataattgtaggtccagatgaactttcaaaaaatatggttgttgtaagaaat
atgtcagatagaactgaaaataaaattttaatttctgagttattagaacatgtaaaaaaa
ctattaatgtaa
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