Candidatus Nitrosopelagicus brevis: T478_1465
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Entry
T478_1465 CDS
T03537
Symbol
pcn
Name
(GenBank) proliferating cell nuclear antigen
KO
K04802
proliferating cell nuclear antigen
Organism
nbv
Candidatus Nitrosopelagicus brevis
Pathway
nbv03030
DNA replication
nbv03410
Base excision repair
nbv03420
Nucleotide excision repair
nbv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nbv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
T478_1465 (pcn)
03410 Base excision repair
T478_1465 (pcn)
03420 Nucleotide excision repair
T478_1465 (pcn)
03430 Mismatch repair
T478_1465 (pcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nbv03032
]
T478_1465 (pcn)
03400 DNA repair and recombination proteins [BR:
nbv03400
]
T478_1465 (pcn)
DNA replication proteins [BR:
nbv03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
T478_1465 (pcn)
DNA repair and recombination proteins [BR:
nbv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
T478_1465 (pcn)
MMR (mismatch excision repair)
Other MMR factors
T478_1465 (pcn)
TLS (translesion DNA synthesis) factors
Other TLS factors
T478_1465 (pcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_N
PCNA_C
Rad1
Rad9
Hus1
Motif
Other DBs
NCBI-ProteinID:
AJA91924
UniProt:
A0A0A7UYN5
LinkDB
All DBs
Position
complement(1203483..1204229)
Genome browser
AA seq
248 aa
AA seq
DB search
MVFSAKTNGAEEWKAIISAISTLVEEATFEATVEGISFRGMDPSHVALIDINWPNSAFEK
YNCDSDIKFGVRIDEFSKLIKRSDKSNSIEINISDDNMLLVTIGKNKKYKMRLIESSASD
TPLPKIDYDAKISLTASALDKILGDVQVVSDYLTITSNESSATFSGKGDSGEVDIALETG
QDEIQELSVKQESTGTYSLEYLNPIIKAVGGSVEAVTCEYSSAKPLRVEFKVSNLGQIHF
YLAPRVES
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
ttggttttttcagctaaaacaaatggggcagaggaatggaaagcaatcatctctgcaatt
tctacacttgtagaagaagcaacatttgaggcaactgtcgaaggaatctccttcagaggc
atggatccatctcatgtagcactaattgatatcaattggccaaattctgcatttgaaaaa
tacaactgtgacagtgacataaaatttggagttcgcattgatgaattttcaaaattaatc
aaaagatctgataaaagtaattcaattgaaattaacatatctgacgataatatgcttcta
gtcacaataggtaaaaataaaaaatacaaaatgagattaattgaaagttctgcatctgat
actccgcttccaaaaattgattatgatgcaaaaatatcactaactgcttctgcgttagat
aaaattttaggcgatgtacaagtagtttctgactatcttactatcacatcaaatgaatcc
tctgcaacgttttctggcaaaggtgactctggtgaagttgacattgcactagaaaccggt
caggatgaaatacaggaattatccgtaaaacaagaaagtaccggtacatacagcctcgaa
tacctaaacccaattatcaaagcagttggtggtagcgttgaagcagttacatgtgaatat
tcttcggcaaaaccactaagagttgaattcaaggtttcaaatttaggccaaattcatttc
tatttagctcctcgtgttgagagttaa
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