Candidatus Nitrosopelagicus brevis: T478_1497
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Entry
T478_1497 CDS
T03537
Symbol
glyA
Name
(GenBank) glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
nbv
Candidatus Nitrosopelagicus brevis
Pathway
nbv00260
Glycine, serine and threonine metabolism
nbv00630
Glyoxylate and dicarboxylate metabolism
nbv00670
One carbon pool by folate
nbv00680
Methane metabolism
nbv01100
Metabolic pathways
nbv01110
Biosynthesis of secondary metabolites
nbv01120
Microbial metabolism in diverse environments
nbv01200
Carbon metabolism
nbv01230
Biosynthesis of amino acids
nbv01240
Biosynthesis of cofactors
nbv04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
nbv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
T478_1497 (glyA)
09102 Energy metabolism
00680 Methane metabolism
T478_1497 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
T478_1497 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
T478_1497 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
T478_1497 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
T478_1497 (glyA)
Enzymes [BR:
nbv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
T478_1497 (glyA)
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Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
SelA
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AJA92896
UniProt:
A0A0A7V3W8
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All DBs
Position
1224557..1225876
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AA seq
439 aa
AA seq
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MADSNKESYDKVFSSLEKHHEWFENSIPLIASENIPSPAVREAVMSDFGNRYAEGWPGER
VYAGCTYIDEVEIQCMELAQKLFKAEFADVRSVSGVVANLAIYSAYSNPGDVMIASSIPA
GGHISHGKKEHSGTAGLVHGLDIEFFAFDPEEMTLDVDKTKAKVEDLKSQGKLPKIAMFG
GSVFLFPHPVKELAEFLKGHGMHINYDAAHVAGLIAGGKFQDPLREGTDTMTMSTHKTLF
GPQGGLVIGSEEHAEPIKKAMFPGLTSSHHIHHMGAKAVAFAEALEFGKDYAEQTIKNAK
ALASELNNVGFKVLGEKRGYTESHQTVVNVLDYGDGGTIEADLEKANIIVNRQLIPGDLK
AGRHYMHPGGIRLGTSEITRLGMKESEMKEIASLLKQVVVDKKDAGEIAARVKEFKTDFK
KTQYCFDNKLGAYEYVKLR
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggctgattcaaacaaagaatcgtacgataaggtattttctagtcttgaaaagcatcat
gaatggtttgaaaattcaattccgctaattgctagtgagaatattcctagtccggccgtt
agagaggccgtaatgtcagattttggtaatagatatgcagaaggctggcctggtgagcga
gtctatgctggatgtacctacatcgatgaagttgagattcaatgcatggagttagctcaa
aaattattcaaagctgaatttgcagatgtcagaagtgtttctggcgtggttgcaaacttg
gcaatttattcagcttattcaaatccaggagatgtaatgattgcatcatcaattcctgca
ggaggtcacatctcacatggaaagaaagaacattcaggaactgcaggattagttcatgga
ttagacattgaattctttgcatttgatcctgaagaaatgacattagatgttgataagaca
aaagctaaagttgaagatttgaaatcacaaggaaaattaccaaagattgcaatgtttggt
ggttcggtatttttatttccacacccagtaaaagaattagctgaatttctaaagggtcat
ggtatgcacattaactacgatgcagcacatgttgcaggattaattgcaggtggaaaattc
caagatccacttagagaaggaaccgatacaatgactatgagtactcacaaaactttgttt
ggtccacaaggagggttagtaataggatctgaagaacatgcagaaccaatcaaaaaagca
atgttcccaggattaacaagtagtcatcacattcatcacatgggtgcaaaggcagttgca
tttgccgaagctttagagtttggtaaagattatgcagagcagacaattaaaaatgcaaaa
gcattagcttccgaattaaacaatgtaggattcaaagtgttaggagagaaaagaggttac
acagaatcacaccagacagttgttaacgttttagattatggcgatggtggaactattgaa
gctgatttagaaaaagcaaacatcattgttaatcgtcaattaattccaggagatttgaaa
gcaggtcgtcactatatgcacccaggtggaattcgtttgggaacatctgagattactcgt
ttaggtatgaaagaatctgaaatgaaagagattgcatctttgttgaaacaagttgttgtt
gataagaaagatgcaggagaaattgcagcacgtgttaaagagttcaaaacagatttcaag
aaaacacaatattgttttgataacaaacttggtgcctacgaatacgtaaaattacgttaa
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