Nocardioides sp. JS614: Noca_0002
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Entry
Noca_0002 CDS
T00443
Name
(GenBank) DNA polymerase III, beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
nca
Nocardioides sp. JS614
Pathway
nca03030
DNA replication
nca03430
Mismatch repair
nca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Noca_0002
03430 Mismatch repair
Noca_0002
03440 Homologous recombination
Noca_0002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nca03032
]
Noca_0002
03400 DNA repair and recombination proteins [BR:
nca03400
]
Noca_0002
Enzymes [BR:
nca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Noca_0002
DNA replication proteins [BR:
nca03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Noca_0002
DNA repair and recombination proteins [BR:
nca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Noca_0002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_3
DNA_pol3_beta_2
Motif
Other DBs
NCBI-ProteinID:
ABL79552
UniProt:
A1SCL7
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All DBs
Position
2029..3255
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AA seq
408 aa
AA seq
DB search
MQSPERALLPPPFNPRSTLAPPSRPEGTIVKFRVERDVLADAVAWAARSLPVRPSVPVLA
GLLVEASDDGLVLSTFDYETSARATLTAEVSDEGQALVSGRLLADICRSLPAKPVEMVLD
GARVSLTCGSARFSLQTMPVDDYPSLPSMPAATGTVQSEAFAHAVAQAVTAAGRDDMLPV
LTGVRIEIDGSTISLLATDRFRLSHRELEWSPRTPDESAAALVPARVLGDTAKSLTGGGE
VTIALATTGSGEGIIGFEGHGPGGLRRTTTRLLDGEFPKVRSLFPNEHQTTALVDKAALV
ESVKRVALVAERNTAVQLAFSDGVLTLDAGSGDEAQASESIEATIDGEDITTGFNPQFLL
DGLTAIDQPVVELAFTQASKPVVISGAVDGDDTDSSFRYLLMPRRLLS
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcccagaacgtgcacttctcccacccccgttcaacccccgctcaaccctcgct
ccaccgagccgacccgaaggaaccatcgtgaagttccgcgtcgagcgcgacgtgctcgcc
gatgccgtcgcctgggctgcccgcagcctcccggtccgtcccagcgtccccgtcctcgcc
ggcctgctcgtcgaggcgagcgacgacggcctggtgctctccaccttcgactacgagacc
tccgcccgggccaccctgacggccgaggtgagcgacgaggggcaggccctggtcagtggc
cgactgctcgccgacatctgccggagcctgcccgcgaagcccgtcgagatggtcctcgac
ggggcccgggtgtcgctgacctgtggctcggcgcggttcagcctgcagacgatgccggtt
gacgactacccgtccctgccgagcatgcccgcggcgaccggcaccgtgcagagcgaggcc
tttgcacacgccgtcgcccaggccgtgacggcggcgggtcgcgacgacatgctgcccgtg
ctcaccggcgtgcggatcgagatcgacggctcgaccatctcgctgctcgccaccgaccgg
ttccgcctctcccaccgggagctggagtggagtccgcggaccccggacgagtcggcggcc
gccctggtcccggcacgggtcctcggcgacaccgccaagtccctgaccgggggcggcgag
gtcacgatcgcgctggcgaccaccggctccggcgagggcatcatcggcttcgagggccat
ggtcccggcggactgcgtcggaccacgacccggctgctcgacggcgagttcccgaaggtc
cgcagcctgttcccgaacgagcaccagaccacggcgctggtcgacaaggccgcgctcgtc
gagtcggtgaagcgggtggcgctggtcgccgagcgcaacaccgcggtccagctcgccttc
agcgacggcgtactgaccctcgacgccgggtcgggcgacgaggcccaggcctcggagtcg
atcgaggcgaccatcgacggtgaggacatcaccacgggcttcaacccgcagttcctgctc
gacggcctgaccgccatcgaccagccggtggtcgagctcgccttcacccaggcctccaag
ccggtggtgatcagcggcgcggtcgacggcgacgacaccgactcgtcattccgctacctg
ctgatgccgcgccgcctgctctcctag
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