Nocardioides sp. JS614: Noca_0004
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Entry
Noca_0004 CDS
T00443
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
nca
Nocardioides sp. JS614
Pathway
nca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Noca_0004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nca03400
]
Noca_0004
DNA repair and recombination proteins [BR:
nca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Noca_0004
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_21
SbcC_Walker_B
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ABL79554
UniProt:
A1SCL9
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Position
4254..5516
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AA seq
420 aa
AA seq
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MYVAHLSLHDFRSYATAEVELSPGVTAFIGRNGQGKTNLVEAIDYLSRLSSHRVASDAPL
VRAGADQAVVRAAVVRDGRTAVLEVELNPGRSNRARVNRSPLPRARDLVGLVRTVVFSPE
DLTLVKGDPADRRRFLDDLLVLRVPRLAGVRADYDRVLRQRNTLLKTARKGGFARKGGFA
RKGGFAPLGPPEGRPEGPPEGRTGGSATSGPPSRSVALDTLAVWDAHLARTGAELLAERL
ALVEALRPYVGKAYETVARGATRDDAEIDYKPSFDLEGRTGRDDLVEALLAEVERRRGDE
LDRGVSLVGPHRDELLLTLGHGSPDSRLPVKGYASHGESWSFALALRLAAYDLLRADGDD
PILILDDVFAELDTERRAQLADLVAGAEQVLVTAAVAADVPAGLAGARFAVGNGEVLREQ
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
gtgtacgtcgcgcacctctcgctccacgacttccggtcctacgccacggccgaggtcgag
ctgtccccgggcgtcacggcgttcatcggccgcaacggacagggcaagaccaacctcgtc
gaggcgatcgactacctctcccggctgagctcgcaccgcgtcgccagcgacgccccgctg
gtgcgggccggcgcggaccaggccgtggtgcgggccgcggtcgtgcgcgacgggcgtacg
gcggtgctcgaggtcgagctcaaccccggccggtcgaaccgcgcccgggtgaaccgctcc
ccgctcccccgggcccgcgatctcgtggggctggtgcgcacggtcgtgttctccccggag
gacctgaccctggtcaagggcgacccggccgaccggcgccgcttcctcgacgacctgctg
gtgctgcgcgtgccccggctcgcgggagtgcgtgccgactacgaccgggtcctgcggcag
cgcaacacgctcctcaagacagcacgcaaggggggcttcgcacgcaaggggggcttcgca
cgcaaggggggcttcgccccccttggaccccccgaaggacgccccgagggaccccccgag
ggacgcacgggaggctctgctacctctgggccccccagtcggtcggtcgccctggacacg
cttgccgtgtgggacgcgcacctggcccgcaccggtgccgagctgttggccgagcggctc
gccctggtggaggcgctgcggccgtacgtcggtaaggcctacgagaccgtcgcacgtggg
gccacccgcgacgacgccgagatcgactacaagccgtccttcgacctcgaggggcgcact
ggccgcgacgacctggtcgaggcgctgctcgccgaggtggaacggcgtcgcggtgacgag
ctcgaccgcggggtctcgctcgtcggcccgcaccgcgacgagctgctgctgacgctcggc
cacggcagtcccgacagccggctcccggtgaagggctacgcctcgcacggcgagtcgtgg
tcgttcgcgctcgcgttgcggctcgcggcgtacgacctgctccgcgccgacggtgacgac
ccgatcctgatcctcgatgacgtcttcgccgagctggacaccgaacgccgcgcccagctc
gccgacctcgtggccggcgccgagcaggtgctcgtcacggcggccgtcgcggccgacgtc
ccggccggcctcgccggcgcccgcttcgcagtcgggaacggcgaggtcctccgtgagcag
tga
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