Nocardioides sp. JS614: Noca_0133
Help
Entry
Noca_0133 CDS
T00443
Name
(GenBank) ATP-dependent DNA helicase, RecQ-like protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
nca
Nocardioides sp. JS614
Pathway
nca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Noca_0133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nca03019
]
Noca_0133
03400 DNA repair and recombination proteins [BR:
nca03400
]
Noca_0133
Enzymes [BR:
nca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Noca_0133
Messenger RNA biogenesis [BR:
nca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Noca_0133
DNA repair and recombination proteins [BR:
nca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Noca_0133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
Cas3-like_C_2
HEM4
Motif
Other DBs
NCBI-ProteinID:
ABL79678
UniProt:
A1SCZ3
LinkDB
All DBs
Position
146475..148619
Genome browser
AA seq
714 aa
AA seq
DB search
MSAPAETDVRRSAEAHLRALVGPRPGEPEPVLREDQWAAIEALAVHRRRALVVQRTGWGK
SAVYFVATLLLREQGAGPTVIVSPLLALMRNQIAAAERAGIRAVTINSTNIEDWEPIHEA
IAAGEVDVLLVSPERLNNPGFRDEVLPRLAATCGLLVVDEAHCISDWGHDFRPDYRRIRT
LLGELPDGIPVLATTATANARVTDDVAEQLGVSTGSATDGFGEVLVLRGSLDRESLRLGV
VRLRTAEQRLAWLADHLAEQPGSGIVYCLTVAATQEIADYLRSRGHEVAAYSGQTDPTER
HALEQDLVNGRVKALVATSALGMGFDATLGFVVNMGAPPSPVAYYQQVGRAGRGTTLPPE
GATVVLLPAIEDRDIWAYFASLAFPREEQVRRTLEVLGAEGRPLSTATLETYVDLNRTRL
ETMLKVLDVDGAVRRVRGGWEATGREWSYDEERYRRVTEARQREQQAMLDYIATDACRMR
FLRDQLDDPEAEDCGRCDNCGGLTLSADVSAAALEDAGARLARPGVAVEPRKMWPSALAN
LGIELKGKIAEGAQEGRAVARLTDLGHGQALRELFAPATPDGPVPVPLVRAVLEVLGDWR
PPVDAIVVVESQTRPTLTADLAAGLSRHLGVPVVGRWAIVNPDIVPGQGAANSAQRVAAV
GRRFALQVDQPLDGLRVLLVDDRTDTGWTLTLAARAVRRAGAAEVRPLVLATTT
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgccccagccgagaccgacgtacgccgcagcgcggaggcgcacctgcgcgcgctc
gtcgggccgcggccgggtgagccggagccggtgctgcgcgaggaccagtgggccgcgatc
gaggcgctcgccgtgcaccgccgccgggcgctcgttgtgcagcgcaccggctggggcaag
tccgcggtctacttcgtggcgacgctgttgctgcgcgagcagggtgccgggccgacggtc
atcgtctccccgctgctggccctgatgcgcaaccagatcgcggcggccgagcgggccggg
atccgcgcggtgacgatcaactccaccaacatcgaggactgggagccgatccacgaggcg
atcgcggccggcgaggtcgacgtgctgctggtcagtcccgagcggctcaacaacccgggc
ttccgcgacgaggtgctgccccggctggccgcgacctgcggcctcctggtcgtcgacgag
gcgcattgcatctccgactggggccacgacttccggcccgactaccgtcggatccgcacc
ctgctgggcgagctccccgacggcatcccggtgctcgcgaccaccgcgaccgccaacgcc
cgggtcaccgacgacgtcgccgagcagctcggggtctcgacgggctcggccaccgacggc
ttcggcgaggtcctggtgctgcgcggttcgctggaccgcgagtcgctgcgcctcggcgtg
gtccggctccggaccgcggagcagcggttggcctggctcgccgaccacctcgccgagcag
cccgggtccggcatcgtctactgcctgacggtcgccgccacccaggagatcgccgactac
ctgcgctcgcgcggccacgaggtcgcggcgtactccggccagaccgacccgaccgagcgg
cacgccctcgagcaggacctggtgaatggccgggtcaaggcgctggtcgccacgagcgcg
ctcggcatgggcttcgacgccaccctcggcttcgtggtcaacatgggcgcgccgccctcg
ccggtcgcctactaccagcaggtcggccgcgccggccgcggcacgactctgccgccggag
ggggcgaccgtcgtgctgctgcccgcgatcgaggaccgcgacatctgggcctacttcgcc
tccctcgccttcccgcgcgaggagcaggtccgccgcacgctcgaggtgctgggggcggag
ggccggccgctcagcacggccaccctggagacctacgtcgacctcaaccgcaccaggctg
gagacgatgctcaaggtgctcgacgtcgacggcgccgtacgccgggtccgcggcggctgg
gaggccaccggtcgcgagtggtcctacgacgaggagcgctaccgccgggtgaccgaggcg
cgccagcgcgagcagcaggctatgctcgactacatcgcgaccgacgcctgccggatgcgg
ttcctgcgcgaccagctcgacgacccggaagccgaggactgcgggcgctgcgacaactgc
ggcgggctcaccctctccgccgacgtctcggccgccgcgctcgaggacgccggcgcccgg
ctggcccggcccggggtcgccgtcgagccgcggaagatgtggccgagcgcgctggccaac
ctcggcatcgagctcaagggcaagatcgccgagggcgcccaggagggccgggcggtggcc
cggctcaccgacctcggccacggccaggcgctgcgcgagctcttcgcgccggcgaccccg
gacggcccggtcccggtgccgttggtccgcgcggtcctcgaggtgctcggtgactggcgg
cccccggtcgacgcgatcgtggtcgtcgagtcgcagacccggcccacgctgacggccgac
ctggccgccggcctgtcccgccacctcggggtccccgtggtgggacggtgggcgatcgtc
aaccccgacatcgtccccggccagggggccgccaactccgcgcagcgggtcgccgccgtc
gggcggcgcttcgccctccaggtcgaccagccgctggacgggctgcgggtgctgctcgtc
gacgaccgcaccgacaccggatggacgctgaccctggcggctcgcgccgtacgccgcgcc
ggcgccgcggaggtccgaccgctggtcctcgccaccaccacctga
DBGET
integrated database retrieval system
