Nocardioides sp. JS614: Noca_0226
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Entry
Noca_0226 CDS
T00443
Name
(GenBank) LysR, substrate-binding protein
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
nca
Nocardioides sp. JS614
Brite
KEGG Orthology (KO) [BR:
nca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nca03000
]
Noca_0226
Transcription factors [BR:
nca03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Noca_0226
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
T6SS_Tse3_N
GerE
Motif
Other DBs
NCBI-ProteinID:
ABL79771
UniProt:
A1SD86
LinkDB
All DBs
Position
243144..244100
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AA seq
318 aa
AA seq
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MTPTQLRAFATVVRLGSVKAAAAELEVSEAAVSLHVGQLRKELGDQLFNRTASGLAFTPG
GLRLASRAVELLGLQDRTVLEVREAGVGRRMLRLGTTSLFAEYAAPGLIGLFADRARDLD
VELSVHRARDFEQLLLTRTVDAVVGPRPATGDPALISKLFLNYQVLAVVGPEHPVTRGQP
GIAMLRDQTWLLGPSAADDAGVIPGLLQRIGVPEERQQIFQSHAAALEEAKRGRGITLAV
AFAVAQDLATGALVRVPGRPVQGQGSWNISILGGERATPAAEEMARFVTTPRATQAMLRG
RGVTHGRFKPAVHVTLWS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
gtgaccccgacccagctccgggcgttcgcgaccgtcgtccgcctcgggtcggtcaaggcc
gcggccgccgagctcgaggtgtcggaggcggcggtgtccctgcacgtcgggcagctgcgc
aaggagctcggcgaccagctcttcaaccggaccgcgtcgggcctcgcgttcacgcccggc
gggctgcggctggccagtcgcgcggtggagctgctcggcctccaggaccgcaccgtgctc
gaggtgcgggaggccggcgtcggccgccggatgctgaggctcggcaccacctcgctgttc
gcggagtacgccgcccctgggctgatcggcctgttcgccgaccgcgcccgcgacctcgac
gtcgagctcagcgtccatcgggcgcgggacttcgagcagctgctgctgacccgcacggtc
gacgcggtcgtcggcccgcgcccggccaccggcgacccggcgctgatcagcaagctcttc
ctcaactaccaggtcctggccgtggtcggtcccgagcaccccgtcacccgcggtcagccc
ggcatcgcgatgctccgcgaccagacctggctgctcggaccctcggccgccgacgacgcc
ggagtgatccccggactgctgcagaggatcggcgtacccgaggagcggcagcagatcttc
cagtcccacgccgccgcgctcgaggaggccaagcgcggccgcggcatcacgctcgccgtg
gcgttcgccgtcgcccaggacctcgccaccggcgccctggtccgcgtccccggtcgcccg
gtacagggccagggctcgtggaacatctcgatcctcggcggcgagcgggccacgccggct
gcggaggagatggcgcgcttcgtcacgaccccccgggccacccaggcgatgctccgcggc
cgcggtgtcacccacggccggttcaagcccgccgtgcacgtgaccctctggagctga
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