Nocardioides sp. JS614: Noca_0251
Help
Entry
Noca_0251 CDS
T00443
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
nca
Nocardioides sp. JS614
Pathway
nca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Noca_0251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nca03400
]
Noca_0251
Enzymes [BR:
nca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Noca_0251
DNA repair and recombination proteins [BR:
nca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Noca_0251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ABL79796
UniProt:
A1SDB1
LinkDB
All DBs
Position
263534..266875
Genome browser
AA seq
1113 aa
AA seq
DB search
MTLQIHRASRTDVLADALGDLLRTPLADPFAEEVVVVPAKGVERWLTQRLSHRLGAGPRG
DDGVCAGVRFLNPRSLVSLLLGRERDDPWDPERLVWPLLATIDESLGEREFATLGRHLGH
GVDGADGELRRNRRYSVALRLAHLFASYALQRPSLVTAWREGRDGEHGGEQGLPPDLAWQ
PELWRRLIAQVDAPPPDVRHAQTCAALQAGGDGLPLPDRLSLFGHTRIPVTEVALLKALG
EHRDVHLFLPQPSPVLWDDLADLGGPGGVVPRAADDSVERVGHPLLASLGRDARELRRLL
DGVSSEEVRPPAGTPTGSTTDPVTLLGWLQHDLRANHAPSYDERSTRELDPDDHSLQVHA
CHGPARQVDVLREVLVGLLEDDPTLEPRDVLVMCPDIETYAPLISAGFGLATTDGHPAHR
LRVKLADRALTSTNPLLAVAGDLLDLAGGRVTASDVLDLAGTDPVRRRFGFTDDELDRVS
RWVARAGVRWGLDEESRAAFRMERFPHNTWRTGLDRILLGVAMSGDDHHHLGRGLPLDDV
ASSEIDLAGRLAELVARVDRTLTVLAGARTVADWATGLRDGVRSLVDVAADDAWQVPQFE
RELGRAAASSHEGGLELRLADVRAMLESRLAGRPTRANFRTGSLTVATMVPMRSVPHRVV
CLVGLDDGVFPRAGAVDGDDVLGRHPLTGERDVRSEDRQLLLDAVLAATEHLVITYSGAD
EQSGASLPPAVPLGEILDAADRTTNAPVRDRVLTRHPLQPYDARNFTRERPFSFDTAALA
GARSARGVRREPPPLLDGPLPPRLALDGRAADVSLQDLRDFLGHPVRAFLRGRLDVATPF
EPDDLADAIPVSLDSLEKWQIGDRLLRQLLAGQDPVAVLTAEQLAGTLPPRGLGTLALHE
VAEECQRLWSRTADLRDGERRSVDVDVDLRDGRRLTGTVPGVYGSRVVSLGYSRLNARQR
LHAWVDLLALSATYPDQHWTAHAVGKDRAGPKRALCGPLDHRAVGWLRDLVDLRDRGLCA
PLPVPVKTGAAWADAHARELMGQDHPPVEAARREWETDPHNQFGITGEDADPYHQRVYGP
AAPVEALLDAGLGEHAWAIWEPLLTGGERVGPL
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
gtgaccctgcagatccaccgagcctcgcgcaccgacgtgctcgcggacgcgctcggggac
ctgctgcgcaccccgctggccgacccgttcgccgaggaggtcgtggtcgtcccggccaag
ggcgtggagcggtggctgacccagcggctcagccaccgcctcggcgccggaccgcgcggt
gacgacggggtctgcgcgggggtccggttcctcaatccgcggtcgctggtgtcgctcctg
ctcgggcgcgagcgcgacgacccgtgggaccccgagcggctcgtctggccgctgctcgcg
acgatcgacgagagcctcggcgagcgtgagttcgcgacgctcgggcggcacctcggccac
ggcgtggacggcgccgacggcgagctgcgccgcaaccgccgctactcggtggcgttgcgg
ctggcgcacctgttcgcgtcgtacgcactgcagcggccgtcgctggtgaccgcctggcgg
gagggccgcgacggcgagcacggtggcgagcaggggctgccgcccgacctggcctggcag
cccgagctgtggcgccggctgatcgcccaggtcgacgcgccccctcccgatgtccggcac
gcccagacgtgcgcggctctgcaggcgggcggcgacggcctgccgctgcccgaccggctc
tcgctgttcggccacacccggatcccggtgaccgaggtcgcgctgctgaaggccctgggg
gagcaccgcgacgtgcacctgttcctgccccagccctcgccggtgctctgggacgacctg
gccgacctcggcggacccgggggcgtcgtgccccgggcggccgacgactccgtcgagcgg
gtcggacatccgctgctcgcctccctcggccgcgacgcgcgcgagctccggcggctgctc
gacggcgtctcgtcggaagaggtgcgcccacctgcggggaccccgaccggatcgaccacc
gacccggtgaccctgctcggctggctccagcacgacctgcgcgccaaccacgccccgtcg
tacgacgagcgctcgacgcgcgagctcgacccggacgaccacagcctgcaggtgcacgcc
tgccacggcccggctcgtcaggtcgacgtgctgcgcgaggtgctggtcggcctgctcgag
gacgacccgaccctcgagccgcgcgacgtcctggtgatgtgccccgacatcgagacctac
gcgccgctgatctcggccgggttcggtctcgcgaccaccgacgggcaccccgcccaccgg
ctgcgggtgaagctcgccgaccgcgcgctcaccagcaccaaccccctgctcgccgtcgcc
ggggacctgctcgacctggccggcggccgggtcaccgcgtccgacgtgctcgacctggcg
ggcaccgacccggttcgccgccggttcgggttcaccgacgacgagctggaccgggtgtcg
cggtgggtggcccgcgccggcgtccggtggggcctcgacgaggagtcgcgcgcggcgttc
cggatggagcggttcccccacaacacctggcgcaccggcctcgaccggatcctgctgggc
gtcgccatgagcggcgacgaccaccaccacctcggccgggggctgccgctcgacgacgtc
gccagctccgagatcgacctcgcgggacgtctcgccgagctggtcgcgcgggtcgaccgc
accttgaccgtgctcgccggcgcgcggacggtcgccgactgggccaccggcctgcgcgac
ggcgtccggtcgctcgtcgacgtcgcggccgacgacgcctggcaggtcccgcagttcgag
cgcgagctcgggcgcgccgccgcgtcgtcgcacgagggtgggctcgagctgcggctcgcc
gacgtgcgcgcgatgctcgagtcgcggctggccgggcgcccgacccgcgccaacttccgc
accggcagcctgaccgtcgccaccatggtgccgatgcgctcggtgccgcaccgcgtggtc
tgcctggtcggcctcgacgacggggtcttcccgcgcgcgggtgcggtcgacggcgacgac
gtgctcgggcggcatccgctcaccggcgagcgcgacgtccgcagcgaggaccggcagctg
ctcctggacgctgtcctcgccgcgaccgagcacctcgtcatcacctactccggcgccgac
gagcagtccggggcgagcctcccgcccgccgtacccctcggcgagatcctcgatgccgcc
gaccgcaccaccaacgcgccggtccgcgaccgggtcctgacccgccacccgctccagccc
tacgacgcacgcaacttcacccgcgagcgcccgttcagcttcgacaccgccgcgctggcc
ggcgcccggtcggcccggggcgtacgccgcgagccgccgccgctgctcgacgggccgctg
ccaccacggcttgccctggacgggagggccgcggacgtgtcgctgcaggacctgcgcgac
ttcctgggtcacccggtccgggccttcctgcgtgggcggctggacgtggcgacgccgttc
gagcccgacgacctggccgatgcgatcccggtgtcgctcgacagcctggagaagtggcag
atcggtgaccggctgctgcggcagctgctcgccggccaggacccggtcgccgtgctgacc
gccgagcagctcgccggcacgctgccgccgcgcgggctcggcaccctcgcgctccacgag
gtcgcggaggagtgccagcggctgtggtcgcgcaccgccgacctgcgcgacggcgagcgc
cggtcggtcgacgtcgacgtcgacctgcgtgacgggcggcggctcaccggcacggtgccc
ggcgtctacggaagccgggtggtcagcctcggctactcccggctcaacgcgcggcagcgg
ctgcacgcgtgggtcgacctgctcgcgctgtcggcgacctaccccgaccagcactggacg
gcccacgcggtcgggaaggaccgcgcgggtccgaagcgcgcgctgtgcggaccgctcgac
caccgcgccgtcggctggctgcgcgacctggtcgacctccgcgaccgcggcctctgcgct
ccgctgccggtgccggtgaagaccggagccgcgtgggcggacgcccacgcgcgcgagctg
atgggccaggaccacccgccggtcgaggccgcgcgacgggagtgggagaccgacccccac
aaccagttcggcatcaccggcgaggacgccgacccctaccaccagcgcgtctacggcccg
gctgcgcccgtcgaggccctgctcgacgccggtctcggtgagcacgcctgggcgatctgg
gagccgctgctgaccggcggcgaaagggtcggccccctgtga
DBGET
integrated database retrieval system
