Nocardioides sp. JS614: Noca_0253
Help
Entry
Noca_0253 CDS
T00443
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
nca
Nocardioides sp. JS614
Pathway
nca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Noca_0253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nca03400
]
Noca_0253
Enzymes [BR:
nca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Noca_0253
DNA repair and recombination proteins [BR:
nca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Noca_0253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
RecD_N
Helicase_RecD
AAA_22
UvrD-helicase
SH3_13
Mg_chelatase
PhoH
SLFN-g3_helicase
AAA_16
nSTAND3
Herpes_Helicase
NTPase_1
NACHT
AAA_5
T2SSE
AAA_28
TrwB_AAD_bind
AAA_24
AAA_29
SRP54
CbiA
ATPase
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ABL79798
UniProt:
A1SDB3
LinkDB
All DBs
Position
270200..271954
Genome browser
AA seq
584 aa
AA seq
DB search
MTELFEPVDEHDWRIATGATGLLATFNAAGVLTSSDVHVATRIGVLGGETDERMLLAVAL
TVRAVRRGSVCLDLAGVAATAPDLPWPDEWPVAGSPLVHAGVVRWDHELLYLDRYHRLER
QVHDDLAARLALAPPAVDEQRLEAALARLGGGHFSEEQRAAVVAAVRRRTTILTGGPGTG
KTTTVARLLALLADQAAGRGSRLSIALAAPTGKAATRLQEAVVTELAAVATAWPEAPALV
GRLDGLTLHRLLGWRPDNATRFRHDRANRLKYDVVVVDESSMVELTMMGRLLEALRPDSR
LVLVGDPQQLTSVGAGAVLSDLVAGYEGRPDSPVAALSTNFRSEEDIKSLAAALRSGDAD
EVIAVLRAPSEQVSWVETSDAAEVEAALRPDSLASARAVWAAARDEDAERALAELDRYRL
LCAHREGLYGVRRWNHLVERWLAEDPDVEIYDEWYVGRPLLVTSNDYALDVYNGESGVVV
RQDQRRRVFVAGSERLKEFAPGRLEAVETMHAMTIHKSQGSQADRVSVLLPDEGSRLLTL
ELFYTAITRARHHVRVVGSEAAVRAAVDTRAQRATGLRARLADG
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
gtgactgagctgttcgagcccgtcgacgagcacgactggcggatcgccaccggcgccacc
gggctgctcgccaccttcaacgcggccggggtgctgacctccagcgacgtgcacgtcgcc
acccggatcggtgtcctcggcggcgagaccgacgagcggatgctgctggcggtcgcgctg
accgtgcgggccgtccgccgcggctcggtctgcctcgacctcgccggcgtggccgcgacc
gccccggacctgccctggcccgacgagtggccggtggccggctcgccgctcgtgcacgcc
ggggtggtgcgctgggaccacgagctgctctacctcgaccgctaccaccggctcgagcgg
caggtccacgacgacctggccgcgcgcctcgcgctcgcaccgccggcggtcgacgagcag
cggctcgaagcggcgctggcgaggctcggcggcgggcacttcagcgaggagcagcgggcg
gccgtggtcgcggccgtgcgccggcgtaccaccatcctgaccggcggccccggcaccggg
aagaccacgacggtggcgcgcctgctcgcgctgctcgccgaccaggccgccggacgaggg
agcaggctctcgatcgcgctggcggcgccgaccggcaaggccgcgacccggctgcaggag
gccgtggtcaccgagctcgcggcggtcgcgacggcctggccggaggcgccggccctggtc
ggacgactcgacgggctgaccctgcaccggctcctcggctggcgcccggacaacgcgacc
cggttccgccacgatcgcgccaaccggctcaagtacgacgtggtcgtggtcgacgagtcc
tcgatggtcgagctgacgatgatgggccggttgctggaggccctgcgcccggactcgcga
ctggtgctggtcggcgacccgcagcagctcacctcggtcggcgcgggtgcggtgctgagt
gacctggtggccggctacgagggccggccggactcgccggtcgcggcgttgagcaccaac
ttccgctccgaggaggacatcaagtccctggcagcggcgctgcgctccggcgacgccgac
gaggtgatcgcggtgctgcgcgcgccgtcggagcaggtctcctgggtcgagacctccgac
gcggccgaggtcgaggccgcgctgcgccccgactcgctcgcgtccgcccgcgcggtctgg
gccgcggcgcgcgacgaggacgccgagcgcgcgctggccgagctggaccgctaccggctc
ctgtgcgcgcaccgcgaggggctctacggcgtccgccgttggaaccacctcgtcgagcgc
tggctcgccgaggaccccgacgtggagatctacgacgagtggtacgtcggccgtccgctg
ctggtcaccagcaacgactacgccctcgacgtctacaacggggagagcggggtcgtcgtg
cggcaggaccagcggcggcgagtgttcgtggcggggtcggaacggctcaaggagttcgcg
cccggccgtctcgaggcggtcgagacgatgcacgcgatgacgatccacaagagccagggc
agccaggccgaccgggtgagcgtgctgctccctgacgaggggtcgcggctgctcaccctc
gagctgttctacacggcgatcacccgggcccggcaccacgtgcgcgtggtcgggtcggag
gccgccgtgcgcgccgccgtcgacacccgggcgcagcgggccaccggtctgcgggcgcgt
ctcgcggacggttga
DBGET
integrated database retrieval system
