KEGG   Nocardioides sp. JS614: Noca_0408
Entry
Noca_0408         CDS       T00443                                 
Name
(GenBank) Thrombospondin type 3 repeat
Organism
nca  Nocardioides sp. JS614
SSDB
Motif
Pfam: TSP_3 Dockerin_1
Other DBs
NCBI-ProteinID: ABL79951
UniProt: A1SDR6
LinkDB
Position
complement(439817..442225)
AA seq 802 aa
MDRKSSLVLLLLLALALVGMGAPAASSPSSEFVRPSWGDGQLPAGCVVDRDPLNPDNLCY
HMKVGLNALDSPKVDVDVLVPVSPAAERDMRVAEQAVMMWEGGLHHLADQMDLPWLKDGF
DMNVRTHQVVVDPTGALQQPLALVDPEIVVIVSNPAGGVGIGIDPVSFAGELGIIDGEGA
PCAAVPSPLDFGTWTDKPGFEQHGREKGGVYVEDCGGVGGNVCFAVNGAVDPVPGASDFF
GLFDLVAHEFGHCLTLGHVGDGADGPWGPTPTNDIMAYSTDPPGVAKCVSTLDVEGFALR
MSRYLDVNGDGAVDRHDHLAPNDVRGDGFNSFQVQHPDDHLYASSTGDPADCPQPELGPV
PLSYGSWSPKPVATTRPVLRTSSLQVTNGHVHVRGDATNEPLGKTPTQRSARATDATSDS
PTPVTDLTGVQVSVTRRTVDATMSVTQVWPVAQGGSATAYSLLVSGRRFDSFICTGDTSG
TPQVMDNGTGYYLPGGSATWNYDDNTVTFHIRRDYLADQQIEAPYTVNAITGLHARGNDW
IATTDAAPDGAGLRLAAPPMGAETRDAPVARTVRTARVELTPEGGASVLPTDSTLGVGLV
SAVDSRDYFDLPIAKQATAEVTLSWTGSTIFGLSVNGGSGQQVAEQDGRITVTVPWARRD
LSITVDPQEVVEPTTYTLTARLTTVRADHDRDRVPDVADRCPTRPGPSASSGCPDTDADG
ILDRDDRCPTEASASASGCPTDGDERVVLIVDGRRLAAQTVVTAHGSAAFTLDGVVGRGT
HRVVLAWIRDGKVVARISRRAG
NT seq 2409 nt   +upstreamnt  +downstreamnt
atggatcgcaagagctccctcgtccttctcctgctgctcgccctcgccctggtggggatg
ggcgcgccggcggccagcagcccgtcgagcgagttcgtccgtccgagctggggtgacggt
cagctgcccgcaggctgcgtggtcgaccgcgacccgctcaaccccgacaacctctgctac
cacatgaaggtgggcctgaacgccctcgactccccgaaggtcgatgtcgacgtgctggtg
ccggtctcccccgcggccgagcgtgacatgcgggtcgccgagcaggccgtgatgatgtgg
gaaggcggcctgcaccatctcgccgaccagatggacctgccctggctgaaggacgggttc
gacatgaacgtccgcacccaccaggtcgtggtcgaccccaccggagcgctgcagcagccc
ctcgccctggtcgatcccgagatcgtcgtgatcgtcagcaacccggccggcggggtcggc
atcgggatcgacccggtgtcgttcgccggcgagctcgggatcattgacggcgagggcgct
ccgtgcgccgccgtgccctccccgctggacttcggcacgtggacggacaagccggggttc
gagcagcacggccgcgagaagggcggtgtgtacgtcgaggactgcggcggcgtcggcggc
aacgtctgcttcgccgtcaacggcgcggtggacccggtgcccggcgcgtccgacttcttc
ggcctcttcgacctggtggcccacgagttcggccactgcctcaccctgggccacgtgggc
gacggcgccgacggcccctggggcccgacgccgaccaacgacatcatggcctacagcacc
gacccgccgggcgtcgccaagtgcgtctccaccctcgacgtcgagggcttcgcgctgcgg
atgagccggtacctcgacgtcaacggagacggggcggtggaccggcacgaccacctcgcc
cccaacgacgtccggggcgacgggttcaactcgttccaggtgcagcaccccgacgaccac
ctctacgcctcctcgaccggggaccctgcggactgcccgcagcccgagctcggtcccgtc
ccgctcagctacggcagctggagcccgaagcccgtcgccacgacacgtccggtgctgcgg
acctcctccctgcaggtcaccaacggccacgtgcacgtgcgcggtgacgccaccaacgag
cccctcggcaagacgccgacccagcgcagcgcgcgggcgaccgacgccacgtccgactcg
cccaccccggtcacggacctgaccggcgtccaggtgtcggtgacgcgcaggacggtggac
gcgacgatgtcggtcacccaggtgtggccggtcgctcagggcgggtcggccacggcgtac
agcctgctcgtctcggggcgccgcttcgactccttcatctgcaccggggacacgtccggc
accccgcaggtgatggacaacggcaccggctactacctgcccgggggcagcgcgacctgg
aactacgacgacaacaccgtcaccttccacatccgccgcgactacctggccgaccagcag
atcgaggcgccgtacacggtcaacgccatcaccggcctgcacgcgcgcggcaacgactgg
atcgcgaccacggacgccgctccggacggcgccgggctgcgcctggccgcgccgccgatg
ggcgccgagacccgcgacgcgccggtcgcccggacggtgcggaccgcacgggtcgagctg
accccggagggcggcgccagcgtcctgcccaccgacagcacgctcggcgtcggcctggtc
agcgccgtcgacagccgcgactacttcgacctgccgatcgcgaaacaggcgaccgccgag
gtcaccctgagctggaccggctccacgatcttcggcctctccgtcaacggcggctcgggg
cagcaggtggcggagcaggacggccgcatcaccgtcaccgtcccgtgggcccgccgggac
ctgtcgatcaccgtcgacccgcaggaggtcgtcgagccgacgacctacacgctgaccgcc
cgactgaccacggtgcgggccgaccacgaccgcgaccgggtgccggacgtcgccgaccgg
tgcccgacccggcccgggcccagcgccagcagcggctgccccgacaccgacgccgacggc
atcctcgaccgggacgaccggtgcccgaccgaggcctcggcgagcgcgtccgggtgcccg
acggacggcgacgaacgggtcgtcctgatcgtcgacgggaggcggctggccgcacagacg
gtggtcaccgcccacggcagcgcggccttcaccctcgacggcgtggtcggccgaggcacg
caccgcgtggtgctcgcctggatccgtgacggcaaggtcgtcgcgcggatcagccggcgg
gccgggtag

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