Nocardioides sp. JS614: Noca_0778
Help
Entry
Noca_0778 CDS
T00443
Name
(GenBank) deoxyribodipyrimidine photo-lyase type I
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
nca
Nocardioides sp. JS614
Brite
KEGG Orthology (KO) [BR:
nca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nca03400
]
Noca_0778
Enzymes [BR:
nca01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Noca_0778
DNA repair and recombination proteins [BR:
nca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Noca_0778
Prokaryotic type
Noca_0778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ABL80303
UniProt:
A1SER8
LinkDB
All DBs
Position
complement(822258..823619)
Genome browser
AA seq
453 aa
AA seq
DB search
MPPSTPAVLWFRRDLRLADNPALVEAAADGPVLPLFVLDPVLWGPAGAARRAYLGASLRA
LDASLRERGTRLSVVRGDPARLVPRAARAVGAARVHVAADFGPYGSRRDGAVEQALTGAG
AELVRTGSPYAVAPGRVTNTAGAPYRVFTPFHRAWAEHGWRGPVGVPEGTGWLRLAEGTA
EIPDPALPDGLTLPAAGEAAARRRWAEFLDRVDEYAEDRDRPAVDGTSQMSAHLKWGEIH
PRTMLADLARRRGAGAATYRKELAWREFYADVLHARPETARQYLRPEFARMRYDEPGEHL
DAWRHGRTGFSVVDAGMRQLRATGWMHNRVRMITASFLVKDLHLEWQLGARHFLRWLVDG
DLASNQHGWQWTAGCGTDAAPYFRVFNPTAQGRRFDPRGEYVRRWVPELADPDVVADPHD
PSPSERQAVGYPEPIVDHAAERREALGRWERIR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgccaccctccacgcctgcggtcctgtggttccgccgcgatctgcgcctggccgacaac
cccgcgctcgtcgaggcggccgccgacggaccggtgctgccgctgttcgtcctcgacccg
gtgctctgggggccggccggggccgctcgccgggcctatctgggcgcgtccctgcgcgcg
ctcgacgcctcgctgcgcgagcgcggcacccggctgtcggtcgttcgcggcgacccggcg
cgcctggtcccgcgcgccgcccgggcggtcggcgcggcgcgggtgcacgtcgcggcggac
ttcggtccctacgggagccggcgcgacggcgcggtcgagcaggcgctcaccggcgccggg
gccgagctggtccgcacgggctcgccgtacgcggtggcaccggggcgggtgaccaacacc
gcgggcgcgccgtaccgcgtcttcaccccgttccaccgcgcctgggccgagcacggctgg
cgcggcccggtcggcgtgcccgagggcaccgggtggctccgactggcggagggcacggcc
gagatccccgaccccgcgctgccggacgggctgaccctccccgcggccggtgaggccgcg
gcgcggcgtcggtgggcggagttcttggaccgggtggacgagtacgccgaggaccgcgac
cggccggccgtggacggcacctcgcagatgtcggcgcacctgaagtggggtgagatccat
ccgcgcacgatgctcgccgacctggcccggcggcgcggcgccggcgcggcgacgtaccgc
aaggagctggcctggcgggagttctacgccgacgtgctgcacgcccgtcccgagaccgcg
cggcagtacctgcgacccgagttcgcccgaatgcggtacgacgagccgggtgagcacctc
gacgcgtggcgacacggccgcacggggttctcggtggtggacgccgggatgcgccagctg
cgcgcgaccggctggatgcacaaccgggtccggatgatcaccgcgagcttcctggtcaag
gacctgcacctggaatggcagctgggcgcccggcacttcctgcgctggctggtcgacggc
gacctggcgtccaaccagcacggctggcagtggaccgcggggtgcggcaccgacgccgcg
ccgtacttccgggtgttcaacccgacggcgcaggggcgtcggttcgaccctcgtggcgag
tacgtgcgccggtgggtgccggagctcgcggaccccgacgtggtcgccgacccgcacgac
ccgagtccttcggagcggcaggcggtcggctaccccgagccgatcgtcgaccacgcggcc
gagcgccgcgaggcgctcggccggtgggagcggatccgctga
DBGET
integrated database retrieval system
