Nocardioides sp. JS614: Noca_0944
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Entry
Noca_0944 CDS
T00443
Name
(GenBank) ABC transporter, transmembrane region, type 1
KO
K16014
ATP-binding cassette, subfamily C, bacterial CydCD
Organism
nca
Nocardioides sp. JS614
Pathway
nca02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nca00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Noca_0944
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nca02000
]
Noca_0944
Transporters [BR:
nca02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
Noca_0944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_29
AAA_21
AAA_16
AAA_22
AAA_23
RsgA_GTPase
AAA_25
AAA_5
nSTAND1
AAA_28
AAA_18
NACHT
T2SSE
DUF87
AAA_30
Rad17
Zeta_toxin
AAA_33
Motif
Other DBs
NCBI-ProteinID:
ABL80467
UniProt:
A1SF82
LinkDB
All DBs
Position
990990..994235
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AA seq
1081 aa
AA seq
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MRPGDPRIRRQLAPARPQLAVVLAAGVVGSVLLVAQAWVVTELVLAALHDGDVGRWAVLV
AVVFVARSLTGWTTDTMAARAAAVVGTDVRRRVVGAILRSDGSRSSGELATLATRGASAA
EPYLTRYVPALVLAGVLPCVTLVAIATQDPMSALVVVGTLPLIPVFGILVGLATEDRARS
QWRALASLSGHFLDVMRGLPTLVAFRRAGAQAATIRAVTDRYRRRTMDTLRIAFVSSAIL
ELVATLSVALVAVTVGLRLAQGSLDLETSLVVLLLAPEAYWPLRRVGAEFHAAAEGVATF
EAASELVDEPGPTDGVRRAGPMSLEGVTVLRPGRAVPALEDVTLTVPDRGVTALTGPSGC
GKSTLLAVLAGLLEPTSGVVRGPDRRRIAWLPQRPVFVAGTVADNLRLAVPDADEHRLWD
ALRRVALEERVRDLPAGLDTVLGEDGATLSAGERARLALARVVLADRPWVLLDEPTAHLD
ALTEQVVADTVQELGLTRAVVVVAHRPALVALADRVVVLTPPEVPEVVPTVEAAAARPTA
TEPPAEPRRRGLLLPTLVGGLASASGVALTATAGWLIVQASHQPPVLTLLVAIVGVRTFG
LARPALRYVERLRSHDVVLRMLAERRVRVYETVVPLTPGALGRRRGDVLAAIVDDVDSVL
DRELRVRMPVRGALVVAALALAVAAIIEPRSVPVVAGTCLVAGGLGYLLARAGATRAERR
AVESRARLSEVVVEVTQTASELTLWQAERRALSSVSAVSDELGRAAVTAATWLAWARAVV
LAVSGAGVAVMAWVLTPLVADGALSGPMLALLVLLPLALAEVASSVADAGALSARTQAAE
ERLARIAATPPAVADPEDPVPADSRDRVGLERVSAAWADRVVLEDLSLDLRPGDRVAVVG
PTGSGKSTLASLLLRFVDPVRGRIVLGRRSLREIALDDVRRSVGLVDDDPHVFATTLAEN
VRLARPEASDAEVEEALRRARLGDWLDSLPAGLDSWLGDGHAGVSGGERARIAIARSLLA
DQPVLVLDEPAAHLDGATAEALAAEVLDGEQQRTVLWITHAAAGLDRVDRVLDLGTGRKG
A
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
gtgaggccgggcgacccccggatccggcgtcagctcgccccggcccgacctcagctcgcc
gtcgtcctggccgcgggcgtcgtgggcagcgtgctgctggtcgcccaggcctgggtggtc
accgagctcgtgctcgccgcgctccacgacggcgacgtcggccgctgggcggtcctcgtg
gccgtggtcttcgtggcccggtcgctcaccggctggaccaccgacacgatggcggcccgg
gcggctgccgtcgtcggcaccgacgtacgacggcgggtcgtcggcgcgatcctgcgctcc
gacggctcccggtcctccggtgagctggccaccctcgcgacccggggcgcgagtgccgcg
gagccgtacctcacccgctacgtgccggcgctggtgctcgccggggtgctgccctgcgtg
acgctggtcgcgatcgccacgcaggacccgatgagcgcgctcgtcgtggtcggcacgctg
ccgctgatcccggtcttcgggatcctggtcggcttggcgaccgaggaccgggcgcgttcc
cagtggcgcgcgctcgcgtcgctgtcgggtcacttcctcgacgtgatgcgcgggctgccg
acgctggtcgcgttccgccgggccggcgcccaggccgcgacgatccgcgcggtcaccgac
cgctaccggcgccggaccatggacacgctgcgcatcgccttcgtctcctcggcgatcctc
gagctggtggcgaccctgtcggtcgcgctggtcgcggtcaccgtggggctgcggctcgcg
cagggcagcctcgacctggagacctcgctggtcgtgctgctgctggcccccgaggcctac
tggccgctgcggcgggtcggggccgagttccacgccgcagccgagggcgtcgcgaccttc
gaggcggccagcgagctcgtcgacgagccgggcccgaccgacggcgtacgccgggccggg
ccgatgtcgctcgagggcgtgaccgtgctgcgccccgggcgggccgtgcccgccctcgag
gacgtcaccctgaccgtgcccgaccgtggcgtgaccgccctgaccggaccgtccgggtgc
ggcaagtccacgctgctcgcggtcctcgcgggtctgctggagccgacctcgggggtggtc
cgcggcccggaccgccgccggatcgcgtggctgccgcagcgcccggtgttcgtcgcgggc
accgtggccgacaacctccggctcgccgtgcccgacgccgatgagcaccggctctgggac
gcgctgcgccgggtcgccctggaggagcgggtccgcgacctgcccgcgggactcgacacc
gtgctcggcgaggacggggccaccctctccgccggcgagcgggcccggctcgccctggcc
cgcgtggtgctggccgaccgaccgtgggtgctgctcgacgagcccaccgcccacctggac
gccctgaccgagcaggtggtcgccgacaccgtccaggagctcggcctgacccgcgcggtg
gtcgtggtcgcccaccgcccggccctggtcgcactggccgaccgggtcgtcgtcctgacc
ccgcccgaggtgcccgaggtcgtgcccaccgtcgaggcggcggccgctcgtcccaccgcc
acggagcccccggccgagccgcggcgccggggcctgctgctgccgaccctcgtcggcggg
ctggcctccgcgtccggcgtcgcgctcaccgcgaccgccggctggctgatcgtccaggcc
tcgcaccagccgccggtgctcaccctgctggtcgccatcgtcggcgtgcggaccttcggg
ctggcgcgcccggcgctgcggtacgtcgagcggctgcgctcccacgacgtcgtgctccgg
atgctggccgagcgccgggtccgggtctacgaaaccgtcgtaccgctgacccccggcgcc
ctgggccggcgccggggcgacgtgctggccgcgatcgtcgacgacgtggactcggtgctc
gaccgggagctgcgggtccggatgccggtgcgcggtgcgctcgtcgtcgcggcgctcgcg
ctcgcggtggccgcgatcatcgagccgcgctccgtgccggtcgtcgcgggcacctgcctg
gtcgcgggcggcctgggctacctgctcgcccgggccggtgcgacccgagccgagcgccgt
gcggtcgagagccgggcccgcctctccgaggtcgtcgtcgaggtcacccagaccgcgagc
gagctgacgttgtggcaggcggagcgacgcgcgctctcgtcggtgtccgcggtcagcgac
gagctcggtcgcgccgccgtcaccgccgcgacctggctggcctgggcccgcgccgtcgtg
ctggccgtctccggggccggggtcgcggtgatggcctgggtgctgacgccactcgtggcc
gacggcgcgctgtccggtccgatgctcgcgctgctggtgctgctgccgctggccctcgcg
gaggtcgcctcctcggtcgccgacgccggtgccctctcggcccggacccaggccgcggag
gagcggctggcgcggatcgcggccaccccgccggcggtggccgatcccgaggacccggtg
ccggccgacagccgcgaccgggtgggcctcgaacgggtgtcggccgcctgggcggaccgg
gtcgtgctcgaggacctctccctcgacctgcgccccggtgaccgggtcgcggtggtcggc
ccgaccggctcggggaagagcacgctcgcgtcgctgctgctgcggttcgtcgacccggtg
cgcggccggatcgtgctcgggcggcgctcgctgcgggagatcgcgctcgacgacgtacgc
cgcagcgtcggcctggtcgacgacgacccgcacgtgttcgccacgaccctcgccgagaac
gtgcggctcgcccgtcccgaggccagcgacgccgaggtcgaggaggcgctgcgccgggcc
cggctgggggactggctggactcgctgccggccgggctcgacagctggctcggcgacggc
cacgccggggtgtccggcggcgaacgggcccggatcgcgatcgcccggtccctgctcgcc
gaccagccggtgctggtgctcgacgagccggccgcgcacctcgacggagcgaccgcggag
gcactggccgccgaggtcctcgacggcgagcagcagcgcacggtcctgtggatcacgcac
gccgcggccggactcgaccgggtcgaccgcgtgctcgacctcgggactggtagaaaaggg
gcatga
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