Nocardioides sp. JS614: Noca_1074
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Entry
Noca_1074 CDS
T00443
Name
(GenBank) Exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
nca
Nocardioides sp. JS614
Pathway
nca03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Noca_1074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nca03400
]
Noca_1074
Enzymes [BR:
nca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Noca_1074
DNA repair and recombination proteins [BR:
nca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Noca_1074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Peptidase_S66
HTH_32
Fe-ADH
Motif
Other DBs
NCBI-ProteinID:
ABL80592
UniProt:
A1SFK7
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All DBs
Position
complement(1133007..1134242)
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AA seq
411 aa
AA seq
DB search
MALESSLESPAPVRQIANAIAGWVDRLGAVWVEGQVAQVSRRPGLNTVFLTLRDAVADIS
VPVTCSRTLFDGLNPPLVEGASVVLHAKPSYYANRGTLSLYAREIRMVGLGELLARLERR
RQLLAAEGLFAAELKRPLPFLPGTVGLVTAPNSAAERDVLENARRRWPAVAFEIAYAAMQ
GPRSASEVIEAVERLDRDPAVEVIVVARGGGSVEDLLPFSDEALIRAVHRIRTPLVSAIG
HEPDSPLLDLVADVRASTPTDAAKLVVPDVAEEQRNVRRARERARGALARWIAREQAGLD
GLRSRPALADPRMLLDARRDEVDQLRDRARRCLGHALDRAADDIGHHRARARALSPLATL
QRGYAVLQDADGHVVTSVGAVAPKQQVSVRVADGRIHATTTSTEELDVQEG
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggccctggagagctcgctcgagtcgccggccccggtccggcagatcgcgaacgcgatc
gccggctgggtcgaccggctcggcgcggtgtgggtcgagggccaggtggcgcaggtcagc
cggcgacccggcctgaacacggtgttcctcaccctgcgcgacgccgtcgccgacatctcg
gtgccggtgacctgctcgcgcacgctgttcgacggcctgaacccgcccctggtcgagggc
gccagcgtggtcctgcacgcgaagccgtcgtactacgccaaccgcggcacgctctcgctg
tacgcccgcgagatccgcatggtcggcctgggcgagctgctcgcccggctcgagcgacgg
cgccagctgctggctgccgagggactcttcgccgccgagctcaagcgaccgctgccgttc
ctgcccggcaccgtcggcctggtcaccgcccccaacagcgccgccgagcgcgacgtgctc
gagaacgcccgccgccggtggcccgccgtcgccttcgagatcgcgtacgccgcgatgcag
gggccgcggtcggccagcgaggtgatcgaggcggtcgagcgcctcgaccgtgatccggcg
gtcgaggtgatcgtggtcgcccggggcggcggctcggtcgaggacctgctgccgttctcc
gacgaggcgctgatccgcgcggtgcaccggatccgcacgccgctggtctccgcgatcggc
cacgagcccgactccccgctgctcgacctggtcgccgatgtccgcgcctcgacgcccacg
gatgccgccaagctcgtggtcccggacgtggccgaggagcagcgcaacgtgcgccgtgcc
cgggagcgggcgcgcggcgcactggccaggtggatcgcccgggaacaggcgggcctcgac
gggctccgctcccggccggcgctggccgacccgcggatgctcctcgacgcccggcgcgac
gaggtcgaccagctgcgcgaccgggcccggcgctgcctgggccacgcgctggaccgggcg
gccgacgacatcggccaccaccgggcccgcgcccgggcgctgtccccgctggccaccctg
caacgcgggtacgccgtgctccaggacgccgacggccacgtggtcacctcggtcggtgcc
gtcgcgccgaagcagcaggtcagcgtgcgcgtcgccgacggccggatccacgccaccacc
accagcaccgaggagctcgatgtccaagaaggctga
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