Nocardioides sp. JS614: Noca_1102
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Entry
Noca_1102 CDS
T00443
Name
(GenBank) ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member-like protein
Organism
nca
Nocardioides sp. JS614
Pathway
nca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Noca_1102
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TrwC
AAA_30
AAA_19
Viral_helicase1
AAA_22
AAA_11
UvrD_C_2
Helicase_RecD
Zeta_toxin
AAA_16
TraI_hel_assoc_N
DEAD
T2SSE
Thymidylate_kin
PIF1
PhoH
SLFN-g3_helicase
NACHT
TsaE
cobW
AAA_33
Motif
Other DBs
NCBI-ProteinID:
ABL80618
UniProt:
A1SFN3
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Position
complement(1161255..1163873)
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AA seq
872 aa
AA seq
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MHGGVKFYNGAAKAARAYVERDCSRADDYYLGEGTGVAERLTATPAGVAGAGSMDGDEYE
QWVAGIDIDTGCKKGRVREDANALRFVEVTVNGPKTWSLAAALHPEVSEALDGAQDRAAE
QIVGWLALHATTRVGPRGRQVQVPVERIEAAVIRHYTSRAGDPHRHLHLQVNARVFAAGA
WRGLHSVGVRDMIEAINGIGHAAVATDPEFRAVLAARGFTLDPETGEIEQLAPYVGAFSA
RTSQIHRNIDRYEAEWRREHPGEEPGPRLREAWDRRAWADARPDKVVPTGGADLVARWND
ELRALGYRDPAAPAVLETTQVGRIDRDGAAEWVVSQLGAKRSAWNTADIRGKVELLLAQT
NLVTTPAARIELAEDVTARAAARCVRLLATPDLPEHVRSLTSQQVVNVEADVVGRLARRA
EKPARRVRLQGRGLVRVDPTQAAVVGALAGDGQLVVVEGAAGAGKTTALRATRELLARHG
HRLVVVTPTLKAAEVAAAETGADGRSAAWLIHQHGWRWDADGHWARRPDTTPDAAARLRP
GDLLLIDEAGMLDQDTARALLTIADEAGARVALVGDRHQLPAVGRGGVLDHALAWSHPTS
VVSLQKVHRFTDPDYAALSLRMRTGNHPAAVFDALHRRGSILIHPSEAERTAALAEAGAA
GDLVLADTREHVASLNAAIRDQRRADPARDPAESMVTARGERIGVGDRVATRRNDPDLGV
ANRQTWTAIGFGEDGSLVLRGRGRDRVVPTEYANRFVELAYATTVHGAQGETVDRAHVAI
GDTTGAAAAYVAMTRGRLDNTAHLVAESVEDARKLWVEVFGRDRADLGPAHAKRQAIEAV
DRYGTQKRRLSRQETVEEPRRPAPASGGGIGI
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
gtgcacggcggcgtgaagttctacaacggcgcggcgaaggccgcgcgcgcctacgtcgag
cgcgactgttcgcgtgccgatgactactacctcggcgaaggcaccggcgtcgccgagcgg
ctcaccgcgaccccggctggcgtcgcgggagctggctcgatggacggcgacgagtacgag
cagtgggtcgccgggatcgacatcgacaccgggtgcaagaagggtcgggtccgtgaggac
gcgaacgcgctgcggttcgtcgaggtcaccgtcaacggcccgaagacctggtcgttggcc
gctgcgctgcaccccgaggtgtccgaggcgcttgacggagctcaggatcgtgctgcggaa
cagatcgtggggtggctcgcgctgcacgcgaccacccgggtcgggccccgcggacggcaa
gtccaggtaccggtcgagcggatcgaggcggcggtgatccggcactacacgtcgcgggca
ggcgacccgcaccggcatctgcacctccaggtcaacgctcgcgtgttcgcagccggcgcc
tggcggggcctgcactcggtgggtgtgcgcgacatgatcgaggcgatcaacggcatcggg
catgccgcggtcgccaccgacccggagttccgggcggtcctcgccgcacgcggcttcacc
ctggaccccgagaccggggagatcgagcagctcgcgccgtacgtcggggcgttcagcgca
cggaccagtcagatccaccgcaacatcgaccggtacgaagctgagtggcgacgcgagcat
cccggcgaggaaccggggccgcggctgcgtgaggcctgggaccggcgggcgtgggccgat
gcgcggccggacaaggtcgtccccacgggcggcgctgacctggtcgcacgatggaacgac
gagctgcgtgccctgggttaccgcgacccagccgcccctgccgtgctggagacaacgcag
gtcggccggatcgaccgcgacggtgccgcggagtgggtcgtatcccagctcggggcgaag
cggtcggcgtggaacaccgccgacatccgcggcaaggtcgagctcctgctggcccagacc
aacctggtcaccacgcccgcagcgcggatcgagctcgccgaggacgtgaccgcccgcgcc
gccgcacgctgtgttcggctgctcgcgacgcccgacttgcccgagcacgtccggtcgctg
acctcccagcaggtggtgaacgtcgaggctgacgtcgtcggtcgcctcgctcgccgtgcc
gagaagcccgccaggcgggtccgtcttcaaggtcgcggattggtgcgggtcgaccccacc
caggccgccgtcgtcggtgccctggccggtgacggccagctcgtggtcgtggagggcgcg
gccggcgccgggaagaccacggcgctgagggcgactcgggagctgctggcaagacatggg
caccgtctcgtggtggtgacaccgaccttgaaggccgccgaggtcgccgccgcagagacc
ggcgcggacgggcgctccgcggcctggctgatccaccagcacggctggcgctgggacgcc
gacgggcactgggcacgccgacccgacaccacgcctgacgcggccgcgcgcctgcggcca
ggggacctgctgctgatcgacgaggcggggatgctggaccaggacaccgcccgcgcgctc
ctcacgatcgccgacgaggccggggcacgggtcgccctcgtcggcgaccgacaccagctc
ccggcggtcggccgcggaggcgtgctggaccacgcgctcgcgtggtcccacccgacctcg
gtcgtatcgctgcagaaggtgcaccggttcaccgaccccgactacgccgcactctccctg
cgcatgcgcaccggcaaccacccggccgcggtcttcgacgcgctccaccgccgcggatcg
atcctgatccatcccagcgaggccgaacgcaccgccgccctcgccgaagcgggagcggcc
ggcgacctcgtcctcgccgacacccgcgagcacgtggctagcctcaacgccgcgatccgc
gaccaacgccgcgccgaccccgcgcgcgacccggcggagtcgatggtgaccgctcgcggc
gaacggatcggggtcggggacagggtcgccacccgacgcaacgaccccgacctcggagtc
gcgaaccggcagacctggaccgccatcggcttcggcgaggacggcagccttgtactccgc
ggacggggacgcgaccgagtggtcccgacggagtacgcgaacaggttcgtcgagctcgcc
tacgccaccaccgtccacggagcacaaggcgagaccgtcgaccgagcacacgtcgccatc
ggcgacaccaccggcgccgccgcagcctacgtcgcaatgaccagaggccgactcgacaac
accgcgcacctggtggccgagtccgttgaggacgcccgcaagctgtgggtcgaggtcttc
ggccgggaccgcgccgacctcggcccggcccacgcgaagcggcaggcgatcgaggcggtc
gatcgctacggcacccagaagcgtcgcctgtcacggcaggagacggtggaggaaccgcgt
cgaccggccccggcatccggcggcgggatcggcatctga
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