KEGG   Nocardioides sp. JS614: Noca_1107
Entry
Noca_1107         CDS       T00443                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
nca  Nocardioides sp. JS614
Brite
KEGG Orthology (KO) [BR:nca00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:nca02048]
    Noca_1107
Enzymes [BR:nca01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Noca_1107
Prokaryotic defense system [BR:nca02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Noca_1107
SSDB
Motif
Pfam: EcoR124_C T1R_D3-like SWI2_SNF2 HSDR_N ResIII DEAD Herpes_BTRF1
Other DBs
NCBI-ProteinID: ABL80623
UniProt: A1SFN8
LinkDB
Position
1169096..1172137
AA seq 1013 aa
MNLDELGVPGSAPHFEPISVSDESTVVAEFVPDPSKESTYQSEAELEAAFIRLLQEQAYE
YLHLTSAAALEANLRVQLEAVNGITFSEAEWQRFFTETIAGPNKGIVEKTALVQEDHVQI
LRRDDGTTKNVYLIDKRNIHNNRLQVINQYEAAGAHATRYDVTILVNGLPMVHVELKRRG
VDIREAFNQINRYARDSFWAGSGLFEYVQLFVISNGTLTKYYSNTVRDSHLADQRQGKRS
RRKTSNSFEFTSWWADANNRPIADVVGFTKTFFSKHTVLNILTKYCVFDVDRKLLVMRPY
QIVAAERILQRIETSTTYKQFGSLAAGGYIWHTTGSGKTLTSFKAAQLASRLPFVEKVLF
VVDRKDLDYQTMREYERFEKGAANSNTSTSVLAKQLEGPNARIIITTIQKLARFVSYNRQ
HSIYSSHVVVIFDECHRSQFGDMHLAITNVFRRYHLFGFTGTPIFAENAGTSGSPRLRTT
EQAFGEKLHTYTIVDAINDRNVLPFRVDYVNTLKPAEKLTDAQVAAIDTERALLAPERIN
QIVGYIREHFDQKTKRSSAYRLGDRRLAGFNSLFAAASIDAAKRYYAEFARQQSDLASEQ
RLKVGLIFSFTANGEEADGLLAEEEFETGDLDATSRDFLEGAIRDYNALFGTSFDTSADK
FQNYYKDLSERLKSRELDLVIVVNMFLTGFDATTLNTLWLDKNLRSHGLIQAYSRTNRIL
NSVKTYGNIVSFRDLEDATNDALALFGNRDARGIVLLRPYADYYAEYENAVAELTEVFPL
GEQIIGEAAQKQYIALFGVILRLRNILTSFDEFAGHELLTERDYQDYQSIYLNLYAEFRG
AKEAEKESINDDVVFEIELIKQVEVNVDYVLMLVEKWRDARGNGADREMDALMKIQRAID
SSVTLRNKRDLIMDFVETMTVTGDVNDDWRRFVAAKRAEELTSIITEENLKPDETHAFVE
AAFRDGAIPTMGTAITRILPPISRFSPSGGHTVKKQAVIDRLLAFFDRYFGLA
NT seq 3042 nt   +upstreamnt  +downstreamnt
gtgaacctcgacgagctcggcgttcccggcagcgcaccgcactttgagccgatctcggtc
agtgacgagagcacggtcgttgctgagttcgtccctgacccgagcaaggaatcgacgtat
cagtcggaggctgagctcgaagccgcgttcatccggctgcttcaggaacaggcttacgag
tacctgcacctcacctcggccgccgcgttggaggccaacctgcgcgtgcaactggaagcc
gtcaacggcatcacgttctccgaggctgagtggcagcgcttcttcaccgaaacgatcgcc
ggcccgaacaaggggatcgtggagaagactgcgctggttcaggaggaccacgtccaaatc
ctgcggcgcgacgacgggacgacgaagaacgtatatctgatcgacaagcggaacatccac
aacaaccggctccaggtgatcaaccagtacgaagcagccggagcccacgccacgcgttac
gacgtgacgatcctggtcaacggcctaccgatggtgcacgtagaactgaagcgccggggc
gtcgacatccgtgaagccttcaaccagatcaaccgctacgcccgcgacagcttctgggcc
ggctcggggctgttcgagtacgtgcagctgttcgtgatcagcaacggcacgctgacgaag
tactactccaacacggtccgcgactcccatctcgccgaccagaggcaaggcaagcggtca
cgtcggaagacgtcgaacagcttcgagttcaccagctggtgggcggatgccaacaaccgg
ccgatcgccgacgtagttggcttcaccaagacgttcttttccaagcacacggtgctcaat
atcctcacgaagtactgcgtcttcgacgtcgaccgcaaactcctggtgatgcgcccgtac
cagatcgtcgccgctgagcggatcctgcagcgtatcgagacgtcgacgacgtacaaacag
ttcggctcgttggctgccgggggttacatctggcacacgaccgggtcaggcaagacgctg
accagcttcaaggccgcccagctcgcgagtcgtctcccgttcgtggagaaggtgctcttc
gtcgtcgaccgcaaggacctcgactaccagaccatgcgggagtacgaacgcttcgagaag
ggcgcggccaactccaacacctccaccagcgtcctggccaagcagttggagggcccgaac
gcgcggatcatcatcaccacgatccagaagctcgccaggttcgtcagctacaaccggcag
cactcgatctactcctcgcacgtcgtggtgatcttcgacgagtgtcaccgcagccagttc
ggcgacatgcacttggcgatcaccaacgtcttccgccgctaccacctgttcggcttcacc
ggcacaccgatcttcgccgagaacgccggcaccagcggcagcccgcgactgcgcacaacc
gagcaggccttcggggagaagctgcacacctacacgatcgtcgacgccatcaacgaccgg
aacgtgctgcccttccgggtcgactacgtcaacaccctcaagcccgccgagaaactgacg
gacgctcaggtcgcggccatcgacaccgagcgagcactgctggctccggagcggatcaac
cagatcgtgggctacatccgcgagcacttcgaccagaagaccaagcgcagctccgcgtat
cggctcggcgatcgccggctcgcagggttcaactcattgttcgccgccgcctcgatcgac
gccgcgaagcgctactacgccgaattcgcccggcagcagtcagacctggcgtcagagcag
cggctcaaggtcggcctcatcttcagcttcaccgccaatggggaggaggccgacggcctg
ctggccgaggaggagttcgagaccggcgacctcgacgcgacctcacgtgactttctggaa
ggcgcgatccgcgactacaacgcgctgttcggcaccagcttcgacacctcggccgacaag
ttccagaactactacaaggacctctccgagcggttgaagagccgcgagctggacctcgtc
atcgtggtcaacatgttcctcaccggcttcgacgccaccaccctgaacactttgtggctg
gacaagaacctgcgctcccatgggctgatccaggcgtactcgcgcacgaatcgcatcctg
aactcggtcaagacctacggcaacatcgtgtcgttccgcgacctggaggacgccaccaat
gacgcactggcgctgttcggcaacagggacgcccgcggcatcgtcctgctgcggccgtac
gccgactactacgcggagtacgaaaatgccgtcgccgagctcaccgaagtcttcccgctc
ggggagcagatcatcggcgaggcggcgcagaagcagtacatcgccctgttcggagtgatt
ctacgactgcgaaacatcctcacctcgttcgacgagttcgccggacacgagctgctgacc
gagcgcgactaccaggactatcagtcgatctacctcaacctgtacgccgagttccgcggc
gccaaggaagcggagaaggagtcgatcaacgacgacgtcgtcttcgagatcgagttgatc
aagcaggtcgaggtcaacgtcgactacgtgctgatgctcgtcgagaagtggcgcgacgcc
aggggcaacggtgccgaccgagagatggacgcgctgatgaagatccagcgtgcgatcgac
tccagcgtcactctgcgcaacaagcgcgacctgatcatggactttgtagagacaatgact
gtgaccggcgacgtcaacgacgactggcggcgcttcgtcgccgcgaagcgggctgaggag
ctgacgagcatcatcactgaagagaacctcaagcccgacgagactcacgccttcgttgag
gcggccttccgggacggcgccatcccgaccatgggcaccgcgatcacccgtatcctcccg
cccatctcgcggttctctccgagcggcggccataccgtcaagaagcaggccgtgatcgac
cggctgctcgccttcttcgaccgctacttcgggttggcctga

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