Nocardioides sp. JS614: Noca_1128
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Entry
Noca_1128 CDS
T00443
Name
(GenBank) type II secretion system protein E (GspE)
KO
K02652
type IV pilus assembly protein PilB
Organism
nca
Nocardioides sp. JS614
Brite
KEGG Orthology (KO) [BR:
nca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
nca02044
]
Noca_1128
02035 Bacterial motility proteins [BR:
nca02035
]
Noca_1128
Secretion system [BR:
nca02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Noca_1128
Bacterial motility proteins [BR:
nca02035
]
Pilus system
Pilus assembly proteins
Noca_1128
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_29
AAA_22
NIR_SIR_ferr
AAA_16
AAA_30
AAA_14
Motif
Other DBs
NCBI-ProteinID:
ABL80644
UniProt:
A1SFQ9
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Position
1195424..1197115
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AA seq
563 aa
AA seq
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MTVRAQTSGDTVRALVEGGWITRDQLSEAGRLADERSQTVLEVLLESGWVDRTTVVRTAA
ASAGLEYVELTDFIVDMAAVSLLPAEFARRTGVLPLVHEDGELLVAVSVRQAGDIELKDD
LSRLTRSRVRFAIAGRSDIDARINQVYRAEGELTDITSDLAPEDEVDDLSTLTEVSDEAP
VVRFVNLLINQAINDRASDIHIEPTERDMRVRYRIDGVLHDAHRSPKSIQNGVISRLKIM
AEMNIAERRVPQDGRMSVTHQGRRIDLRVATLPTVWGEKVVARILDTSNTQLGLDDLGFS
NENYERYRASYTKPYGMILATGPTGSGKSTTLYATLNLLNRPDVNVITVEDPVEYRLPGI
NQVQTNAKAGLTFASALRSILRSDPDIVLIGEIRDHETAQIAVEAALTGHLVLSTLHTND
APSAVTRLIEMGIEPFLVGSALDAVLAQRLCRSLCERCKQAYQPDPAELQRIGFPWAEGA
EVPVLYRHVGCSSCSQTGYRGRMALHEVMTVSEEVSRLAVARASTDEVGRTAREQGMTTL
KSDGWQKVLQGRTSIEEVLRVVA
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgcgcgcacagacctccggagacaccgtgcgtgccctggtcgagggcggctgg
atcacccgcgaccagctcagcgaggcgggccggctcgcggacgagcggtcccagaccgtg
ctcgaggtgctgctcgagagcggctgggtggaccgcaccacggtcgtgcgcaccgcagcc
gcctcggccggcctggagtacgtcgagctcaccgacttcatcgtcgacatggcggccgtg
agcctgctgccggcggagttcgcccgccgcaccggcgtactgccgctggtccacgaggac
ggcgagctgctggtggccgtgagcgtgcgccaggcgggcgacatcgagctcaaggacgac
ctgagccggctgacccgcagccgggtccgcttcgcgatcgccggccgcagcgacatcgac
gcccggatcaaccaggtctaccgcgccgagggcgagctcaccgacatcacctccgacctg
gcgcccgaggacgaggtcgacgacctcagtaccctcaccgaggtctccgacgaggcgccg
gtggtccgcttcgtcaacctgctgatcaaccaggcgatcaacgaccgcgcctcggacatc
cacatcgagccgaccgagcgggacatgcgggtccggtaccggatcgacggggtgctccac
gacgcccaccgctccccgaagagcatccagaacggggtgatctcgcgcctcaagatcatg
gccgagatgaacatcgccgagcgtcgggtgccgcaggacggccggatgtcggtcacccac
cagggccggcgcatcgacctccgcgtcgccaccctcccgaccgtgtggggcgagaaggtg
gtcgcccggatcctggacacctccaacacccagctcggcctcgacgacctggggttcagc
aacgagaactacgagcgctaccgggcctcgtacaccaagccctacgggatgatcctggcg
accgggccgaccgggtccggcaagtcgacgacgctctacgcgacgctcaacctgctcaac
cggcccgacgtcaacgtgatcaccgtcgaggacccggtggagtaccgcctgccggggatc
aaccaggtccagacgaacgcgaaggcggggctgaccttcgcctccgcgctgcgctcgatc
ctgcgctcggaccccgacatcgtgctgatcggcgagatccgcgaccacgagaccgcccag
atcgcggtcgaggccgcgctgaccggccacctggtgctctcgacgctgcacaccaacgac
gcgccctcggcggtgacccgcctgatcgagatgggcatcgagccgttcctggtcgggtcc
gcgctcgacgccgtactcgcgcagcggctgtgtcgctcgctctgcgagcgctgcaagcag
gcctaccagccggatccggcggagctgcagcggatcggcttcccgtgggcggagggcgcg
gaggtgccggtgctgtaccggcacgtcggctgctcctcctgctcgcagaccggctaccgc
ggccggatggcgctgcacgaggtgatgacggtcagcgaggaggtctcgcggctcgccgtc
gcgcgcgcgtcgaccgacgaggtcggccgcaccgcccgggagcaggggatgaccaccttg
aagtcggacggctggcagaaggtgctgcagggccgcacctccatcgaggaggtcctccgg
gtcgtcgcctga
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