Nocardioides sp. JS614: Noca_1139
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Entry
Noca_1139 CDS
T00443
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
Organism
nca
Nocardioides sp. JS614
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS
PAS_9
PAS_4
PAS_8
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
ABL80655
UniProt:
A1SFS0
LinkDB
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Position
complement(1208957..1211608)
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AA seq
883 aa
AA seq
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MLSGGVPSALCPPTVLVVTDGSREGSTVAASANAVARDVLVTHALTLPSALVALDSSTYD
CVLVDVGTPDVAAADLADTLRGHAGAAALVLVVDDDATIPAALEDLADLVLQQADLTGDW
LRRVRRAVEHARVRAALQESEAAVARLTGIVESVADAVFTTTIDGLVTSWNDGAEALYGF
PAAEMLGAPIATLHPPGSDEPRRILTMVRAGKAIQGLDTLRRTRDGRMAQVSISVTGLRD
HRDGLSGMVVVARDISDRLELEAELVRQTMHDALTGLPNRSFLTYRLTQAIAEGRRRGRP
VAALLLDLDQFRAANDVHGHLTGDRVLTEVADRLRVLARPTDVVARIGGDEFVLVCPDTD
VAAAGRLAEQVIEAVGAPIQVEHRALRVGASVGIAVAPPLDCDAEVLLKHADAAMYEAKK
RGRARSQVFDPALARLAGEQRLLAGDLRAALDDDRLEVHFQPVVDLTSDRMVGFEALTRW
HHPTRGAVPPGTFVPIAEAHGFVADLDHWVLDRACRQTAAALATGELTPGVHVAVNLSAR
SLDEPNLVDTVGEVLDRSGLPPAALVLEATETALPRDPEAARASLAGLRDLGVGISLDDF
GTGYSSLSFLRELPVTGVKIDRSFIRNAVERPEDLAITEAIVRLAKGLGLETIAEGIETA
EQRELLRDLGCARAQGFWWSPAVPMAELPGGRAAARVARILQPAGTADPAPPLRSTRVSR
RIIEPSAPTTVVTTCCLRGGIESGQAWLVVTTAARREAFASSLGPLHATALARGQLVELD
AYETLRRVTSADGRLDQARYDHVVGSALRRLAAAGDQVGVHAELGHVTRPLLSQDVSTDL
RARLHEAAALTLEYGDHPADCAAHGPAVAPVVELFAADGSTAG
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
gtgttgagcggaggagtgccatcggcgctctgcccgcccacggtcctggtcgtcaccgac
gggtcgagggagggcagcacggtcgcggcgagcgcgaacgccgtcgcccgcgacgtcctc
gtcacccacgcgctcaccctcccctccgcgctcgtcgccctcgactcctccacctatgac
tgcgtgctggtcgacgtcggcacccccgacgtcgccgccgccgacctcgcggacaccctg
cgcggccacgccggtgcggccgccctggtgctggtcgtcgacgacgacgccacgatcccg
gcggccctcgaggatctcgccgacctggtgctccagcaggccgacctgaccggcgactgg
ctgcggcgggtccggcgggccgtcgagcacgcccgagtccgggccgccctgcaggagtcc
gaggctgcggtcgcgcggctcaccggcatcgtcgagtcggtcgccgacgcggtgttcacc
accacgatcgacgggctggtcacctcgtggaacgacggggccgaggccctgtacggcttc
cccgccgccgagatgctcggcgccccgatcgccacgctccacccgccggggtccgacgag
ccgcggcggatcctcaccatggtccgcgccgggaaggcgatccagggactggacacgctg
cgacgcacccgtgacggccggatggcgcaggtctcgatcagcgtcaccgggctgcgcgac
caccgcgacggcctcagcggcatggtcgtggtcgcccgcgacatcagcgaccgcctcgag
ctcgaggccgagctggtccgccagaccatgcacgacgcgctgaccgggctccccaaccgc
tccttcctcacctaccggctcacccaggcgatcgccgagggccggcgccgtggccgcccg
gtcgccgccctgctgctggacctcgaccagttccgcgccgcgaacgacgtgcacggccac
ctcaccggcgaccgggtgctcaccgaggtcgcggaccggctgcgggtcctggcccgcccc
accgacgtggtcgcgcggatcggcggcgacgagttcgtcctggtctgccccgacaccgac
gtggcggcggccgggcggctcgccgagcaggtcatcgaggccgtcggcgcaccgatccag
gtcgagcaccgggcgctgcgggtcggcgccagcgtcgggatcgcggtcgcccctcccctg
gactgcgacgcggaggtcctgctcaagcacgcggacgccgcgatgtacgaggccaagaag
cgcggccgcgcccgcagccaggtcttcgacccggcactggcccgcctggccggcgagcag
cggctgctggccggcgacctgcgggccgcgctcgatgacgaccggctcgaggtgcacttc
cagcccgtggtcgacctgaccagcgaccggatggtcggcttcgaggcgctgaccaggtgg
caccacccgacccgcggcgccgtcccgcccgggacgttcgtgccgatcgccgaggcccac
gggttcgtggccgacctcgaccattgggtcctcgaccgcgcctgccggcagaccgccgcc
gcgctcgccaccggcgagctcacccccggcgtgcacgtggcggtcaacctctccgcccgc
tccctggacgagccgaacctggtggacacagtcggcgaggtcctcgaccgctccgggctg
ccgccggcagccctggtcctcgaggccaccgagaccgccctgccccgcgaccccgaggcc
gcccgcgcgtccctcgccgggctccgcgacctgggcgtcgggatctccctcgacgacttc
gggaccggctactcctcgctcagcttcctgcgcgagctgcccgtgaccggcgtgaagatc
gaccggtcgttcatccgcaacgcggtcgagcggcccgaggacctggcgatcaccgaggcg
atcgtgcggctcgccaagggcctgggcctcgagaccatcgccgagggcatcgagaccgcc
gagcagcgcgagctgctgcgcgacctcggctgcgcccgcgcccaggggttctggtggagc
ccggccgtgccgatggccgagctgccgggcggccgcgccgccgcccgggtggcgcggatc
ctgcagcccgccggcaccgccgaccccgccccgccgttgcgcagcacccgggtgtcgcgc
cggatcatcgagccgtctgcgcccaccaccgtggtcaccacctgctgcctgcgtggcggc
atcgagtccgggcaggcctggctggtcgtcaccaccgcggcccgccgcgaggcgttcgcc
agctcgctcggcccgctgcacgccaccgcactggcccggggacagctggtcgagctggac
gcctacgagacgctgcgccgggtcacctcggccgacggccgcctcgaccaggcccgctac
gaccacgtcgtcggctccgcactgcgccgcctcgccgcggccggcgatcaggtgggcgtg
cacgccgagctcggccacgtgacccggccgctgctcagccaggacgtctccaccgacctg
cgggcccggctgcacgaggccgccgccctgaccctggagtacggcgaccacccggccgac
tgcgccgcccacggcccggccgtcgcccccgtcgtggagctgttcgccgcggacggttca
accgccggctga
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