Nocardioides sp. JS614: Noca_1393
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Entry
Noca_1393 CDS
T00443
Name
(GenBank) sigma-70 region 4 domain protein
KO
K03090
RNA polymerase sigma-B factor
Organism
nca
Nocardioides sp. JS614
Brite
KEGG Orthology (KO) [BR:
nca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nca03021
]
Noca_1393
Transcription machinery [BR:
nca03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Noca_1393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
MarR_2
Sigma70_ECF
MarR
HTH_3
KORA
HTH_Crp_2
HTH_37
GerE
HTH_23
DUF6800
Motif
Other DBs
NCBI-ProteinID:
ABL80907
UniProt:
A1SGH2
LinkDB
All DBs
Position
1470960..1471742
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AA seq
260 aa
AA seq
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MEHRREATARLFDELENASDDERRRIRDEIVRLNMGVASDCARRYRQRGIATEDLDQVAY
LGLVKAVRGFEPGRGHDFLSFAVPTIRGEVRRHFRDLGWALRPPRSIQELQSRIHAAEGD
LSQELGRSPRPSDLARHLGVDLEQVLDALGATGCFAPASLDVVGADGDDSLGDRLGTADP
AFDQAEARITLAAVLRGLTPRERRILELRFFGNHTQAEIGADIGVTQMQVSRLLNRILAR
LRERMLAASDEAPVSSGPAA
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggagcaccgacgagaggccaccgcccggctcttcgacgagttggagaacgcgtccgac
gacgagcgccgccgtattcgcgacgagatcgtccggctcaacatgggcgtcgccagcgac
tgcgcccgtcgctaccggcagcgcggcatcgccaccgaggacctggaccaggtggcctac
ctggggttggtcaaggcggtccgcggcttcgagccgggccgcggccacgacttcttgtcc
ttcgcggtgccgacgatccgtggcgaggtgcgccggcacttccgcgatctcggctgggcg
ctgcggccgccccgatcgatccaggagctccagtcgcgcattcacgctgccgagggcgac
ctgtcccaggagctgggtcgctcgccgcggccgagcgacctcgcccgccacctcggggtc
gacctggagcaggtgctcgacgcgctgggcgcgaccggctgcttcgccccggcctcactc
gacgtggtcggcgccgacggtgacgactccctgggcgaccggctcggcacggcggatccg
gcgttcgaccaggccgaggcacggatcacgctggcggcggtgctgcgcggactgacgccg
agggagcgtcggatcctcgagctgcggttcttcggcaaccacacccaggccgagatcggc
gccgacatcggcgtcacccagatgcaggtctcccggctgctgaaccggatcctggcccgc
ctgcgggagcggatgctcgccgcctccgacgaggcgccggtgtcctcgggcccggcggct
tag
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