Nocardioides sp. JS614: Noca_1894
Help
Entry
Noca_1894 CDS
T00443
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
nca
Nocardioides sp. JS614
Pathway
nca00061
Fatty acid biosynthesis
nca00071
Fatty acid degradation
nca01100
Metabolic pathways
nca01212
Fatty acid metabolism
nca02024
Quorum sensing
nca04146
Peroxisome
Module
nca_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
nca00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Noca_1894
00071 Fatty acid degradation
Noca_1894
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Noca_1894
09145 Cellular community - prokaryotes
02024 Quorum sensing
Noca_1894
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
nca01004
]
Noca_1894
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nca04147
]
Noca_1894
Enzymes [BR:
nca01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Noca_1894
Lipid biosynthesis proteins [BR:
nca01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Noca_1894
Exosome [BR:
nca04147
]
Exosomal proteins
Exosomal proteins of breast milk
Noca_1894
Exosomal proteins of breast cancer cells
Noca_1894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ABL81404
LinkDB
All DBs
Position
2020810..2022651
Genome browser
AA seq
613 aa
AA seq
DB search
MTAQASSAPNYDAGFVDNLTQNFALQFLDRVAASAEREAFRYPRGEAWESVTWKQAGDLV
EKLAAGLLALGLESEQRVGIAAGTRYEWILADLAIMCAAGATTTVYPSTNAEDTAYILSD
SECRVVFAEDDEQIAKLKEHRNELPHLGKIVTFDGTTDGDWVIGLDDLAKLGEAYLAEHP
GVVEETVRSIAPDQLATLIYTSGTTGRPKGVRLLHRSWVYEGTAIQVQDILHEDDLQFLW
LPMAHSFGKVLLSAQLACGFATAIDGRVDKIVDNLGVVKPTFMGAAPRIFEKAHGRIVTM
QAAEGGAKEKIFKKAFEVGVKVDQLKREGRSVPLLLGVQHGLFDKLVFSKVRERFGGRVR
FFISGSAALNAEIAEWFHAAGILILEGYGMTENAAGATVNHPADYKIGSVGPALPGSEVK
IGENDEVLLRGPHVMAGYHNLPEETAATLTADGWLHTGDKGSLDADGFLTITGRIKDLFK
TSGGKYVAPSAIESKFKAVCPYASQFLVFGNERNYVVALITLDPDAMAGWAEENGMGGAS
YTDIVNSDQVQKMVGEYVDELNSRLNRWETIKKWRLLDHDLTIESGELTPSMKVKRNIVE
KNNQELIDSLYQG
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcccaagccagcagcgcccccaactacgacgccggcttcgtcgacaacctcacc
cagaacttcgccctccagttcctcgaccgggtcgccgcgtccgcggagcgggaggcgttc
cggtacccgcgaggggaggcgtgggagtcggtcacctggaagcaggccggcgacctcgtc
gagaagctcgccgccggcctgctcgccctggggctggagtccgagcagcgggtcggcatc
gcggccggcacccgctacgagtggatcctcgccgacctggcgatcatgtgcgcggccggc
gcgacgaccaccgtgtacccgtcgaccaacgccgaggacacggcgtacatcctgagcgac
tccgagtgccgggtcgtcttcgccgaggacgacgagcagatcgcgaagctcaaggagcac
cgcaacgagctgccgcacctgggcaagatcgtcacgttcgacgggaccaccgacggcgac
tgggtgatcgggctcgacgacctcgcgaagctgggcgaggcctacctcgccgagcacccg
ggcgtcgtcgaggagaccgtgcgctcgatcgcgccggaccagctcgcgaccctcatctac
acctccggcaccaccggccggcccaagggcgtgcggctgctgcaccggtcctgggtctac
gagggcaccgccatccaggtgcaggacatcctgcacgaggacgacctgcagttcctgtgg
ctgccgatggcgcactccttcggcaaggtgctgctctcggcgcagctggcctgcggcttc
gccaccgccatcgacggacgcgtcgacaagatcgtcgacaacctgggggtcgtcaagccg
acgttcatgggtgccgcgccgcgcatcttcgagaaggcgcacggccgcatcgtcaccatg
caggccgccgagggcggcgccaaggagaagatcttcaagaaggccttcgaggtcggcgtc
aaggtcgaccagctcaagcgcgagggccgctcggtgccgctgctgctgggcgtccagcac
gggctgttcgacaagctggtcttcagcaaggtccgcgagcggttcggcggccgggtgcgg
ttcttcatctccggctccgccgcgctgaacgccgagatcgccgagtggttccacgccgcc
ggcatcttgatcctcgagggctacggcatgaccgagaacgccgcgggcgccacggtcaac
cacccggccgactacaagatcggctccgtcgggccggcgctccccgggagcgaggtgaag
atcggcgagaacgacgaggtgctgctgcgcggcccgcacgtgatggccggctaccacaac
ctgcccgaggagaccgcggcgacgctcaccgccgacgggtggctgcacaccggcgacaag
ggcagcctcgacgccgacggcttcttgaccatcaccggacggatcaaggacctcttcaag
acctccggcggcaagtacgtcgcgccgtcggcgatcgagtcgaagttcaaggccgtctgc
ccctacgccagccagttcctggtcttcggcaacgagcgcaactacgtggtcgcgctgatc
accctcgaccccgacgcgatggccggctgggcggaggagaacgggatgggcggggcgtcg
tacaccgacatcgtcaactccgaccaggtccagaagatggtgggggagtacgtcgacgag
ctgaactcccggctgaaccgctgggagaccatcaagaagtggcggctgctcgaccacgac
ctgaccatcgagtccggtgagctgaccccctcgatgaaggtcaagcgcaacatcgtggag
aagaacaaccaggagctcatcgactcgctgtaccagggctga
DBGET
integrated database retrieval system
