Nocardioides sp. JS614: Noca_2387
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Entry
Noca_2387 CDS
T00443
Name
(GenBank) Holliday junction DNA helicase subunit RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
nca
Nocardioides sp. JS614
Pathway
nca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Noca_2387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nca03400
]
Noca_2387
Enzymes [BR:
nca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Noca_2387
DNA repair and recombination proteins [BR:
nca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Noca_2387
RecFOR pathway proteins
Noca_2387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_16
RNA_helicase
Mg_chelatase
nSTAND3
AAA_3
NTPase_1
Zeta_toxin
MCM
AAA_14
Sigma54_activ_2
NACHT
AAA_18
TsaE
AAA_25
AAA_28
IstB_IS21
Rad17
NB-ARC
Parvo_NS1
AAA_17
ABC_tran
AAA_19
DUF815
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
ABL81892
UniProt:
A1SJA7
LinkDB
All DBs
Position
2541965..2543047
Genome browser
AA seq
360 aa
AA seq
DB search
MTFHEEDLDQAEEVHVRSLTAAEADGDERAVEAALRPRTLDEVVGQVRVRDQLGLVLEAA
RRRGRAPDHVLLSGPPGLGKTTLAMIIASEMGAPLRLTSGPAITHAGDLAAILSGMNEGD
VLFVDEIHRMSRPAEEMLYMAMEDFRVDVVIGKGPGATAIPLEIPPFTLVGATTRAGLLP
GPLRDRFGFTAHLEFYEPDELDLIVQRSARLLDVHVLPDGTAEIASRSRGTPRIANRLLR
RVRDFAQVRADGVVTLPVAQDALDLYEVDQLGLDRLDRGVLDVLCRRFGGGPVGISTLAV
AVGEERETVEEVAEPFLVRNGFLARTPRGRVATPAAWEHLGLTAPPTLTLPESDPPLFED
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgacgttccacgaggaggacctcgaccaggccgaggaggtgcacgtccgctcgctcacc
gctgctgaggcggacggcgacgagcgggccgtcgaggcggcgctgcggccgcgcaccctc
gacgaggtggtcggccaggtccgggtgcgcgaccagctcgggctggtgctcgaggccgca
cgccggcgtggccgggctcccgaccacgtgctgctctccggcccgccgggtctcggcaag
accacgctggcgatgatcatcgccagcgagatgggtgcgccgctgcggctgaccagcggt
ccggcgatcacgcatgccggcgacctggccgcgatcctctccggcatgaacgagggtgac
gtcctcttcgtcgatgagatccaccggatgtcgcggccggccgaggagatgctctacatg
gcgatggaggacttccgggtcgacgtcgtcatcgggaagggccccggcgccaccgcgatc
ccgttggagatcccgcccttcaccctggtcggggcgaccacccgggcagggctgctgccc
ggcccgcttcgagaccggttcggcttcaccgcccacctggagttctacgagcccgatgag
ctggacctgatcgtgcagcgctcggcccggctgctcgacgtgcacgtcctcccggacggg
accgccgagatcgcctcgcgctcgcgcggtacgccgcggatcgccaaccggctgctgcgc
cgggtccgcgacttcgcccaagtccgcgcggacggcgtggtcaccttgccggtcgcccag
gacgcgctcgacctctacgaggtcgaccagctcgggctcgaccggctggaccgcggcgtc
ctggacgtgctgtgccggcgcttcggtggcgggccggtcggcatctccaccctggccgtg
gcggtcggtgaggagcgcgagaccgtggaggaggtcgcggagcccttcttggtccgcaac
ggcttcttggcgcggaccccgcggggccgggtggccaccccggccgcctgggagcacctc
ggtctcacggctcctccgacgctgacacttcccgagagcgatccgccactcttcgaggac
tga
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