Nocardioides sp. JS614: Noca_2440
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Entry
Noca_2440 CDS
T00443
Name
(GenBank) primosomal protein N' (replication factor Y) (superfamily II helicase)
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
nca
Nocardioides sp. JS614
Pathway
nca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Noca_2440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nca03400
]
Noca_2440
Enzymes [BR:
nca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Noca_2440
DNA repair and recombination proteins [BR:
nca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Noca_2440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
Motif
Other DBs
NCBI-ProteinID:
ABL81945
UniProt:
A1SJG0
LinkDB
All DBs
Position
2601488..2603521
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AA seq
677 aa
AA seq
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MTDSEEQPELLPGMVRASVKASRAKARATRARKAAEAEPAAVDPVARVLVDLPLAHLDRP
FDYAVPAAMADDARPGARVKVRFAGQDVDGYLVARAAESEHLGRLAPLRRVVSPEPVLAP
QIEALSAELAERYAGTRSDVLRLAVPPRHATTEKAPSPPVPSWGGPDPAAGEAAWAGHEP
GAAFLRHLTAGGIPRAVWTAAPAADWPVMIAHAVAATYASGRGSLVCVPDHKDVARVGAA
LTDVLGEGRHVTLTADSGPAARYRDFLAVSRGARRVVVGTRGAAFAPVHELGLVVVWDDG
DDLHAEPRAPYPHTRETLLLRAEREGAAALVGGFVRTVEGEYLLRTGWAHELVPAREEVR
RRVTVSVAGDAGDRDVHARGVRMPRAIHQAIREALDDGPVLVQTPRVGYVNALACERCRT
PARCAACQGPLALTGPTTPPACRWCGILAEGWACRECGFRGLRAPVLGDARTAEELGRAF
PGTTVRTSSGEAVVAAVGARPQVVVATPGAEPVAEDGYAAVVLLDTWLLLSRIDLRAEEE
ALRRWANAAGLVRPGGRVVAVGDAAHPALQALVRWDPAGFAARETAERVEAHLPPASRLA
TITGEPGAVDDALILLDAPSGAEILGPVDVGEGESRVVVRVPRAQGPALSHALGQLQRVR
SSRKLDAVRIQVDPPTL
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgacggactcggaggagcagcccgagctgctgccggggatggtccgggcgagcgtcaag
gcgtcgcgtgccaaggcgcgggcgacccgggcccgcaaggccgccgaggccgagccggcc
gcggtcgacccggtcgcccgggtgctggtcgacctcccgctcgcccacctggaccggccc
ttcgactacgccgtcccggccgcgatggccgacgacgcccggcccggagcgcgggtgaag
gtccgcttcgcgggtcaggacgtcgacggctacctcgtggcccgggcggcggagtccgag
cacctcggccggctcgcgcccctgcggcgtgtggtgagccccgagccggtgctggcgccc
cagatcgaggcgctcagcgccgagctcgcggagcggtacgccggcacccgctccgacgtg
ctccggctggcggtcccgccccggcacgcgaccaccgagaaggcgcccagtccgccggtg
ccgtcctggggcggacccgacccggccgcgggcgaggcggcctgggccggacacgagccg
ggcgcggccttcctgcggcacctgaccgccgggggcatcccgcgcgcggtgtggacggcc
gccccggcggccgactggcccgtgatgatcgcccacgccgtggcagcgacgtacgcctcc
gggcgcgggagcctggtctgcgtcccggaccacaaggacgtcgcccgggtcggtgcggcg
ctcaccgacgtcctcggcgagggccggcacgtcaccctgaccgcggactccgggccggcg
gcgcgctaccgcgacttcctcgccgtcagccggggcgcgcgtcgggtggtcgtcggcacc
cgtggggcggcgttcgccccggtccacgagctcgggctggtcgtggtgtgggacgacggt
gacgacctgcacgcggagccgcgcgcgccctacccgcacacgcgcgagaccctgctcctg
cgggccgagcgcgagggtgccgctgcactcgtcggtggcttcgtgcgcaccgtggagggc
gagtacctcctccgcaccggctgggcccacgagctggtgcccgcacgcgaggaggtgcgc
cgacgggtcacggtgtcggtggccggggacgccggtgaccgcgacgtgcacgcgcgcggg
gtgcggatgccccgcgcgatccaccaggcgatccgggaggcactggacgacgggcccgtc
ctcgtgcagacgccgcgggtgggctacgtcaacgccctggcctgcgagcgctgccggacg
ccggcccgttgtgctgcctgccagggaccgctcgccctgaccggcccgacgaccccgccc
gcctgccgctggtgcgggatcctggcggagggctgggcgtgccgggagtgtggcttccgg
gggctgcgtgctcccgtcctcggcgatgcccgtacggccgaggagctgggacgggccttc
cccggcaccaccgtgcgcaccagctcgggcgaggccgtcgtggcagcggtgggcgcccgt
ccccaggtcgtcgtggcgactcccggcgccgagccggtcgccgaggacggctacgccgcg
gtggtgctgctcgacacctggctgctgctgtcccggatcgacctgcgcgccgaggaggag
gcgctgcgccggtgggccaacgccgcaggcctggtgcgccccggcggccgggtcgtggcc
gtcggcgacgcggcccacccggcgctccaggcgctcgtgcgctgggacccggccgggttc
gccgcccgggagaccgccgagcgggtcgaggcgcacctgccgccggccagccggctcgcg
acgatcaccggggagccgggggcggtcgacgacgccttgatcctcctggacgccccatcg
ggtgccgagatcctcggcccggtggacgtcggggagggcgagtcccgcgtcgtcgtccgg
gtgccacgcgcgcaggggccggcgctctcccacgcgctcggccagctccagcgggtccgc
tcgagccgcaagctcgacgccgtccgcatccaggtcgacccaccgaccctctga
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