Nocardioides sp. JS614: Noca_2702
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Entry
Noca_2702 CDS
T00443
Name
(GenBank) putative exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
nca
Nocardioides sp. JS614
Brite
KEGG Orthology (KO) [BR:
nca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nca03400
]
Noca_2702
DNA repair and recombination proteins [BR:
nca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Noca_2702
Archaeal homologous recombinant proteins
Noca_2702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_27
AAA_29
AAA_15
Motif
Other DBs
NCBI-ProteinID:
ABL82205
UniProt:
A1SK70
LinkDB
All DBs
Position
2872086..2874731
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AA seq
881 aa
AA seq
DB search
MRLHHLEITAFGPFADTVAVDFDELSGAGLFLLSGATGSGKTSVLDAVCFALYGDVPGDR
STARRLRSDQAAPGVRPEVTLEATLSGRRFRIVRSPSWERPKKRGAGLTTEQASVSIAER
IDGGWVTHSTRLDETGHLVTRLVGMNTDQFTQVAMLPQGRFQAFLRARSEERHRLLQQLF
RTGRFEGVERWLRDRRLALGREAEALRRRVDGLVHRVSETTGTPAPEEGTADWAHALLAD
ASAQCAETAAAARAAAEAEAEARASWEAARVLTERRARLDTAAAEHQRLTAATSEQEAGR
DRLDAARRAAGVVPLHALAGKAQRAHSAARTVVDRLEVTDRGALEAAVAEAVDGAARMRA
LQPRAARLQQVRTETGRLERRQRSLAEEVAAAHVAARALVQALTAQVAEAREAHARSRSE
AQRLRGHALDVREARLDGMVAELAGALAVGASCPVCGSCDHPHKAATRAGAPDDAAEKAA
QRAADDAAATEHLRDVEVRDLSARLDAATEQVDQVPADLVAQVAAAETALDRLAAEASRL
EAELADYDETVAADFARQEQAGRSALAALDGLAAAGTALEDARTALAAAVVDAGFASADE
AVAASLDQRTYDRLAAAVADHDRRLAAVAAVLSEPGAAEVAAAVLPDLGGLESGHRTTLD
ALGAARAQESAWATRAGRLSGLAAELDAALTAWEPLRDELDLTTRLCSFVEGKSADNRLQ
MRLSAYVLAYRLSQVVTAANARLGAMSDQRYSLEHTGRRGAGETRGGLSLLVRDDWSGES
RDPATLSGGETFVVSLALALGLADVVTQEAGGADLDTLFVDEGFGSLDADTLDDVMGTLD
SLRDGGRVVGVVSHVAEMRDRIPAQLVVTKSRTGSTLRLSR
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgaggctccaccacctcgagatcaccgcgttcggaccgttcgcggacaccgtcgcggtc
gacttcgacgagctgtccggtgccggcctgttcctgctctccggagcgaccggctccggc
aagaccagcgtcctcgacgccgtgtgcttcgccctgtacggcgacgtccccggcgatcgc
agcaccgccaggcggctccggtccgaccaggccgcccccggcgtccgcccggaggtgaca
ctggaggcgacgctgtccggccgccggttccggatcgtccgctcgccgtcctgggagcgg
cccaagaagcgcggcgccggcctgaccaccgagcaggcgtcggtctcgatcgccgagcgc
atcgacggcgggtgggtgacccactcgacccggctggacgagaccggacacctggtcacc
cggctggtcggtatgaacaccgaccagttcacccaggtcgccatgctcccgcagggccgg
ttccaggcgttcctccgggcccgctccgaggagcgccaccggctgctccaacagctgttc
cgaaccgggcggttcgagggcgtcgagcgctggctgcgcgaccggcggctggccctgggc
cgcgaggccgaggcgctgcgccgccgcgtcgacgggctcgtccaccgggtcagcgagacc
accggcacccccgcccccgaggaggggacggccgactgggcgcacgccttgctcgccgac
gcgtccgcgcagtgcgcagagaccgcggccgccgcgcgcgccgccgccgaggctgaggcc
gaggcgcgcgcgtcctgggaggcggcgcgcgtcctgaccgagcgccgggcccgcctcgac
acggccgccgccgagcaccagcggctgaccgcagccaccagcgagcaggaggccggccgc
gaccggctggacgcggcccggcgagcggccggcgtggtgccgctgcacgccctcgccggg
aaggcccagcgagcccactccgcagcccggaccgtggtcgaccggctcgaggtcaccgac
cgtggggcgctcgaggccgccgtcgccgaggcggtcgacggcgccgcccggatgcgggcc
ctgcagccgcgggcggcgcgcctccaacaggtgcgcaccgagaccgggcgcctcgagcgg
cgtcagcggtccctcgccgaagaggtggcggccgcgcacgtcgccgcccgggccctcgtg
caggcgctgaccgcccaggtcgccgaggcccgggaggcccacgcccgctcccgctcggag
gcgcagcggctgcgcggccacgcgctcgacgtacgcgaggcacgcctggacgggatggtc
gccgagctcgccggcgccctcgccgtcggggcgtcctgcccggtctgcgggtcctgcgac
cacccgcacaaggccgcgacccgcgccggagccccggacgatgccgccgagaaggctgcc
cagcgcgcggccgacgacgccgccgcgaccgagcacctgcgcgatgtcgaggtccgcgac
ctgtccgcccggctcgacgcggcgaccgagcaggtcgatcaggtccccgccgacctggtc
gcccaggtcgccgccgccgagaccgcgctggaccggctggcggccgaggcgtcgcggctc
gaggccgagctcgccgactacgacgagaccgtggccgcggacttcgcccgccaggagcag
gccggtcgctcggcgctcgccgcgctggacggcctcgccgccgccggcacggccctcgag
gacgcccggacggcgctggccgcggccgtggtcgacgccgggttcgcgagcgccgacgag
gccgtcgccgcgagcctcgaccagcggacctacgaccgcctcgcggccgccgtcgccgac
cacgaccgccggctcgcggccgtcgccgccgtgctctccgagcccggcgcggccgaggtc
gcagcggccgtgctccccgacctgggcgggctggagagcggccaccgcaccaccctcgac
gcgctgggcgcggcccgtgcccaggagtcggcctgggccacccgcgccgggcgcctgtcc
ggcctggccgccgagctggacgccgcgctgaccgcctgggagccgctgcgtgacgagctc
gacctgaccacccgcctgtgcagcttcgtcgaaggcaagtcggccgacaaccgactccag
atgcggctctccgcctacgtcctcgcctaccggctctcccaggtcgtcaccgccgcgaac
gcgcggctgggcgcgatgagcgaccagcgctactccctggagcacaccggccggcgcggc
gccggcgagacccgcggcggcctgagcctgctcgtgcgcgacgactggtccggcgagtcc
cgcgaccccgcgaccctgtccggtggcgagaccttcgtggtctcgctcgccctggcgctg
gggctggccgacgtcgtcacccaggaggccggcggagccgacctcgacacgctcttcgtc
gacgagggcttcgggtcgctcgacgccgacaccctcgacgacgtgatgggcaccctcgac
tcgctgcgcgacggcggccgcgtcgtcggcgtcgtcagccacgtcgccgagatgcgcgac
cggatccccgcccagctggtcgtcaccaagtcgcgcaccgggtcgacgctgcgactatcc
aggtga
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