Nocardioides sp. JS614: Noca_2980
Help
Entry
Noca_2980 CDS
T00443
Name
(GenBank) sigma-70 region 3 domain protein
KO
K03086
RNA polymerase primary sigma factor
Organism
nca
Nocardioides sp. JS614
Pathway
nca02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
nca00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Noca_2980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nca03021
]
Noca_2980
Transcription machinery [BR:
nca03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Noca_2980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
FBF1
IF2_N
Motif
Other DBs
NCBI-ProteinID:
ABL82482
LinkDB
All DBs
Position
3168409..3169368
Genome browser
AA seq
319 aa
AA seq
DB search
MAVRTAVSAGTREIEGRDSVGLYLDEIARNPLLDAASEVELSKAIEAGLMAEHLLAEGRV
GRKKGGAPMTATAEELEWLAEEGRKAVDTFITANLRLVVSIARKYGRAQMPMLDLIQEGN
TGLIRAVEKFDYTKGYKFSTYATWWVRQAITRGIAQQARVVRLPVHVVEELNQVGGARRT
LERKLGREPEPREIAEELGMEVDRVLDLMAWGREHVSLDSPVDEDGDTSLGDLMAQETAP
GPDLNFIDVESRDRLNSLVGKLDDRAADIIRSRYGLVDGRQHKLADIGAKHGISAERVRQ
LEREALQKLRRLGDPDLAA
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggctgtacgcaccgccgtcagcgcaggcactcgagagatcgagggccgcgacagcgtc
ggcctgtacctcgacgagatcgcccgcaaccccctgctcgacgccgcctccgaggtggag
ctgtcgaaggcgatcgaggccggcctgatggccgagcacctgctcgccgagggccgggtc
ggccgcaagaagggtggcgcgccgatgacggccaccgccgaggagctggagtggctcgcc
gaggagggccgcaaggccgtcgacacgttcatcaccgccaacctgcgcctggtcgtctcg
atcgcgcggaagtacggccgtgcccagatgccgatgctggacctgatccaggagggcaac
accggcctgatccgcgcggtggagaagttcgactacaccaagggctacaagttctcgacc
tacgcgacctggtgggtccgccaggcgatcacccgcggcatcgcccagcaggcccgcgtg
gtccggctgccggtgcacgtggtcgaggagctcaaccaggtcggcggcgcgcgccgcacc
ctggagcgcaagctgggccgtgagccggagccgcgcgagatcgccgaggagctcggcatg
gaggtcgaccgggtcctggacctgatggcctggggccgcgagcacgtcagcctcgactcc
cccgtcgacgaggatggcgacacctcgctgggcgacctgatggcccaggagaccgcgccg
ggcccggacctgaacttcatcgacgtcgagtcccgcgaccggctcaacagcctggtcggc
aagctcgacgaccgcgcggcggacatcatccgctcgcgctacggactggtcgacgggcgc
cagcacaagctcgccgacatcggcgccaagcacggcatctccgccgagcgggtgcgccag
ctcgaacgcgaggcgctgcagaagctccgccgcttgggcgacccggacctcgcggcctga
DBGET
integrated database retrieval system
