Nocardioides sp. JS614: Noca_3052
Help
Entry
Noca_3052 CDS
T00443
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
nca
Nocardioides sp. JS614
Brite
KEGG Orthology (KO) [BR:
nca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nca03009
]
Noca_3052
Enzymes [BR:
nca01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
Noca_3052
Ribosome biogenesis [BR:
nca03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Noca_3052
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ABL82554
LinkDB
All DBs
Position
complement(3251166..3252104)
Genome browser
AA seq
312 aa
AA seq
DB search
MSRDADHRVLSVPEGLAGERVDAALARMFGLSRTRGAELIAAGNVLVDGAPVGKSDRVLP
GSTVAVTIPVEADPLAVVPEVVEGIKILHDDDDIVVIDKPVGVAVHPSPGWSGPTVVGHL
AGAGFRISTSGAPERQGIVQRLDVGTSGVMVICKSEHAYSVLKNAFRRRTVDKVYHALVQ
GHPDPLEGTIDAPIGRHPKADYKFAVMADGRHSVTHYETLEAHRFASLLEIHLETGRTHQ
IRVHMAALKHPCVGDPTYGADPSLARRVGLERQWLHAVRLGFEHPETGKQVEYESEYPED
LAHALEVIRDAH
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgcgacgccgaccatcgggtgctctcggtgcccgagggcctcgcgggggagcgg
gtcgacgcggccctggcgcggatgttcggcctctcgcgcacccgcggcgccgagctgatc
gccgccgggaacgtgctcgtcgacggagcgccggtcggcaagagcgaccgggtgctgccg
ggctcgaccgtggccgtgaccatccccgtcgaggccgacccgctcgcggtcgtccccgag
gtcgtcgaggggatcaagatcctgcacgacgacgacgacatcgtggtgatcgacaagccc
gtcggcgtcgccgtgcacccctcgccgggctggtccggccccaccgtggtcggccacctt
gccggcgccggcttccgcatctccaccagcggcgcccccgaacggcaggggatcgtccag
cgcttggacgtcggaacctcgggcgtgatggtgatctgcaagtccgagcacgcctactcg
gtgctcaagaacgcgttccggcgccgcaccgtcgacaaggtctaccacgcgctggtgcag
ggccacccggacccgctcgagggcaccatcgacgctccgatcgggcggcaccccaaggcc
gactacaagttcgcggtgatggccgacgggcggcacagcgtcacgcactacgagacgctc
gaggcgcaccggttcgccagcctgttggagatccacctcgagaccggccgcacccaccag
atccgggtgcacatggcggcgctcaagcacccgtgtgtcggtgaccccacgtacggcgcc
gaccccagcctggcgcgccgggtcgggttggagcggcagtggctgcacgccgtacgcctc
ggcttcgagcatcccgagaccggcaagcaggtcgagtacgagtcggagtacccggaggac
ctcgcgcacgcgctcgaggtgatccgcgatgcgcactag
DBGET
integrated database retrieval system
