Nocardioides sp. JS614: Noca_3177
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Entry
Noca_3177 CDS
T00443
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
nca
Nocardioides sp. JS614
Pathway
nca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Noca_3177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nca03019
]
Noca_3177
03016 Transfer RNA biogenesis [BR:
nca03016
]
Noca_3177
Enzymes [BR:
nca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Noca_3177
Messenger RNA biogenesis [BR:
nca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Noca_3177
Transfer RNA biogenesis [BR:
nca03016
]
Prokaryotic type
tRNA degradation factors
Noca_3177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_PNO1_2nd
PCB_OB
KH_KhpA-B
KH_NusA_1st
Motif
Other DBs
NCBI-ProteinID:
ABL82679
UniProt:
A1SLJ4
LinkDB
All DBs
Position
complement(3375064..3377292)
Genome browser
AA seq
742 aa
AA seq
DB search
MTDPEISAVETVLDNGKFGTRTVKFETGLLARQAAGAVTAYLDEDTMLLSATTAGKHPKD
HFDFFPLTIDVEERMYAAGKIPGSFFRSEGRPGEDAILTCRLIDRPLRPTFKKGLRNEVQ
VVITVMALNPDTPYDVLAINAASLSTQLSGLPFSGPVGGVRVALIEGQWVAFPTHSQLEN
AVFDMVVAGRVTETGDVAIMMVEAEATEQTWDLVRSGTQAPTEEIVAGGLDAAKPFIKQL
CEAQVELANVAAKPVQDFPVFLDYEDDVYDAVEAAVKAELAAAMKIADKQERNDRTDELK
DEVLAKLGEQFEGREKEIGAAFRSVNKQVVRESILRDKVRIDGRGLADIRPLHAEVGVIP
RVHGSALFERGETQILGVTTLDMLKMEQQLDTLSPEKHRRYMHKYVFPPFSTGETGRVGS
PKRREVGHGALARRALLPVLPTREEFPYAIRQLSEAMGSNGSTSMGSVCASTLALLQAGV
PLKAPVAGIAMGLVSGEIDGQLQYVALTDILGAEDAFGDMDFKVAGTREFVTALQLDTKL
DGIPAEVLAQALTQARDARLTILDVMAEAIDEPEEMSAYAPRIITITIPVDKIGEVIGPK
GKIINQIQDDTGASISIEDDGTIYIGATNGEAAEAAKNAVNAIANPTMPEVGERYLGTVV
KTTNFGAFVSLMPGKDGLLHISKLRSLAGGKRVDAVEDVVSVGQKIQVQIAEIDDRGKLS
LVPVVEGDQADSDTAEAGSEEE
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgaccccgagatctctgccgtcgagaccgttctggacaacggcaagttcggcacc
cgcaccgtcaagttcgagaccggcctactggcccggcaggctgccggcgccgtgaccgcc
tacctcgacgaggacaccatgctcctgtcggccaccacggccggcaagcacccgaaggac
cacttcgacttcttcccgctcaccatcgacgtcgaggagcggatgtacgccgcgggcaag
atccccggctcgttcttccgcagcgagggccgtccgggcgaggacgcgatcctcacctgc
cgcctcatcgaccggccgctgcgcccgaccttcaagaagggcctgcgcaacgaggtccag
gtcgtcatcaccgtgatggcgctcaaccccgacacgccgtacgacgtgctcgcgatcaac
gccgcctcgctctccacccagctctcgggcctgccgttctccggccccgtcggcggcgtc
cgcgtggcgctgatcgagggccagtgggtcgccttcccgacccacagccagctcgagaac
gccgtgttcgacatggtggtcgccggacgcgtcaccgagaccggtgacgtcgcgatcatg
atggtcgaggccgaggccaccgagcagacctgggacctggtccgctccggcacccaggcg
ccgaccgaggagatcgtggccggcggtctcgacgccgccaagccgttcatcaagcagctc
tgcgaggcgcaggtcgagctggcgaacgtcgcggcgaagccggtccaggacttccccgtc
ttcctcgactacgaggacgacgtgtacgacgcggtcgaagcggccgtgaaggccgagctg
gccgcggcgatgaagatcgccgacaagcaggagcgcaacgaccgcaccgacgagctcaag
gacgaggtcctggccaagctcggcgagcagttcgagggccgtgagaaggagatcggcgcg
gcgttccgctcggtcaacaagcaggtcgtccgggagagcatcctgcgcgacaaggtccgc
atcgacggccgcggcctggccgacatccggccgctgcacgccgaggtcggcgtgattccg
cgggtgcacggctcggcgctgttcgagcgtggggagacccagatcctgggcgtcacgacg
ctggacatgctcaagatggagcagcagctcgacacgctctcgccggagaagcaccgccgt
tacatgcacaagtacgtcttcccgccgttctccaccggcgagaccggccgggtcggctcg
ccgaagcgccgcgaggtcggccacggcgcgctggcgcgccgggcgctgctgccggtgctg
cccacgcgcgaggagttcccctacgcgatccgccagctctccgaggcgatgggctccaac
ggctcgacctcgatgggctcggtctgcgcgtccacgctcgcactgctccaggccggtgtg
ccgctgaaggccccggtcgccggcatcgcgatgggcctggtctccggcgagatcgacggc
cagctccagtacgtcgccctcaccgacatcctcggtgccgaggacgcgttcggcgacatg
gacttcaaggtcgccggcacccgcgagttcgtcaccgcgctgcagctggacaccaagctc
gacggcatcccggccgaggtcctcgcccaggcgctgacccaggcgcgcgacgcccgcctg
accatcctcgacgtgatggccgaggccatcgacgagcccgaggagatgtcggcgtacgcc
ccgcggatcatcacgatcacgatcccggtcgacaagatcggcgaggtgatcggccccaag
ggcaagatcatcaaccagatccaggacgacaccggcgcgtcgatctcgatcgaggacgac
ggcacgatctacatcggtgcgaccaacggcgaggcggccgaggcggccaagaacgccgtc
aacgcgatcgccaacccgaccatgcccgaggtcggcgagcgctacctcggcacggtcgtc
aagacgaccaacttcggcgcgttcgtctcgctgatgcccggcaaggacggcctgctgcac
atcagcaagctccgctcgctggccggcggcaagcgggtcgacgcggtcgaggacgtcgtc
tcggtcggccagaagatccaggtccagatcgccgagatcgacgaccgcgggaagctgtcg
ctggtcccggtcgtcgagggcgaccaggccgactccgacaccgccgaggccggctccgag
gaggagtga
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