Nocardioides sp. JS614: Noca_3593
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Entry
Noca_3593 CDS
T00443
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nca
Nocardioides sp. JS614
Pathway
nca03420
Nucleotide excision repair
nca03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Noca_3593
03430 Mismatch repair
Noca_3593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nca03400
]
Noca_3593
Enzymes [BR:
nca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Noca_3593
DNA repair and recombination proteins [BR:
nca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Noca_3593
MMR (mismatch excision repair)
Other MMR factors
Noca_3593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
DEAD
Terminase_6N
ResIII
Motif
Other DBs
NCBI-ProteinID:
ABL83093
UniProt:
A1SMQ8
LinkDB
All DBs
Position
complement(3811375..3813768)
Genome browser
AA seq
797 aa
AA seq
DB search
MPATPTSDGPEPTRRGPTREELLEGLNEPQRAAVVHEGAPLLVVAGAGSGKTRVLTRRIA
WLISERKAHPGSILAITFTNKAAAEMKERVEDLVGRRARIMWVSTFHSACVRILRKEVDK
LGFKSNFSIYDAADQKRLMTLVCNDLDLDPKRYQPGALLHWVSNQKNELRDPDEATKDAR
NHLEETYAAAYTTYQRRLRQANALDFDDLIMFTVHLFQQFPEVRETYRRRFRHVLVDEYQ
DTNHAQYAFIHQLCADRMEELDPSAERIEPAELMVVGDADQSIYAFRGANIRNILDFEQD
FPNATSILLEQNYRSTQTILTAANSVIGHNQARKPKRLWSDAGDGERIVGYVADDEHDEA
RFVSEEIDRLTDAKAYRPGDVAVFYRTNAQSRVFEEIFIRLGMPYKVVGGVRFYERREVR
DALAYLRLLVNPADQVSLRRILNTPKRGIGDRAVACVNALAERDRTTFWEALRRAEDAPG
LATRSLTQIQGFVAMIEELQSMVDGGERPDVILETTLARSGYLTALEESDDPQDETRLEN
LAELVAVAREFADDPVAGPSADPADVDAGTVAPGLADFLERVALVADADQIPDDDPEDAG
VVTLMTLHTAKGLEFPVVFLTGLEDGVFPHARSLGEQQELEEERRLAYVGVTRARERLYV
SRAVVRSAWGAPSHNPGSRFLDELPVDLVDWRRTEAAQTRWGRPDLASGSAARLGSPTAA
GRRNFSAAAVRADAAARAKPAREIPSLEPGDRVLHDSFGMGTVVALEGVAEKAVASIDFG
SEGVKRLLLRYAPVEKL
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccacccccacgtccgacgggccggagccgacccgccgcggacccactcgcgag
gagctgctcgaggggctcaacgagccccagcgggcggccgtcgtccacgagggcgcgccg
ctcctggtcgtcgcgggagcgggctcgggcaagacccgggtgctgacccgccggatcgcc
tggctgatctccgagcggaaggcccaccccgggtcgatcctggcgatcacgttcaccaac
aaggccgcggccgagatgaaggagcgggtcgaggacctggtcggccggcgggcccggatc
atgtgggtctcgacgttccactccgcctgcgtgcggatcctccgcaaggaagtcgacaag
ctggggttcaagtcgaacttctcgatctacgacgcggccgaccagaagcggctgatgacg
ctggtctgcaacgacctggatctcgacccgaagcgctaccagccgggcgcgctgctgcac
tgggtgtccaaccagaagaacgagctgcgcgaccccgacgaggcgaccaaggacgcgcgc
aaccacctggaggagacctacgccgcggcgtacaccacctaccagcggcggctgcgccag
gccaacgcgctcgacttcgacgacctgatcatgttcacggtccacctgttccagcagttc
cccgaggtgcgcgagacctaccggcgccggttccggcacgtgctcgtcgacgagtaccag
gacaccaaccacgcgcagtacgccttcatccaccagctctgcgccgaccggatggaggag
ctggacccgtccgcggagcgcatcgagccggccgagctgatggtcgtcggtgacgccgac
cagtcgatctacgcgttccggggcgccaacatccgcaacatcctcgacttcgagcaggac
ttcccgaacgccacctcgatcctgctcgagcagaactaccgctccacgcagacgatcctg
accgccgcgaactcggtgatcggccacaaccaggcgcgcaagcccaagcggctgtggtcc
gacgccggcgacggcgagcggatcgtcgggtacgtcgccgacgacgagcacgacgaggcg
cggttcgtctccgaggagatcgaccggctcaccgacgcgaaggcctaccggcccggggac
gtcgccgtgttctaccgcacgaacgcccagtcgcgagtgttcgaggagatcttcatccgc
ctcggcatgccctacaaggtggtcgggggcgtccgcttctacgagcgccgtgaggtccgg
gacgcgctcgcctaccttcggctgctggtcaaccctgccgaccaggtctcgctgcgccgg
atcctgaacacccccaagcggggcatcggcgaccgggccgtcgcgtgcgtcaacgccctc
gcggagcgggaccggaccacgttctgggaggcgctgcgccgcgcggaggacgcgccgggg
ctcgccacccggtcgctgacccagatccaagggttcgtcgcgatgatcgaggagctccag
tcgatggtcgacgggggcgagcgccccgacgtgatcctggagaccacgctggcgcgctcg
ggctacctcaccgcgctggaggagagcgacgacccccaggacgagacccggctggagaac
ctcgccgagctggtcgccgtcgcgcgcgagttcgccgacgaccccgtcgcaggtccgtcc
gccgacccggccgacgtcgacgccggcaccgtcgcgccgggcctggcggacttcctggag
cgggtcgcgctggtcgccgacgccgaccagatccccgacgacgaccccgaggacgccggt
gtcgtcaccctgatgaccctgcacaccgcgaagggcctggagttccccgtcgtcttcctc
accggtctcgaggacggcgtgttcccgcacgcgcgctcgctcggtgagcagcaggagctc
gaggaggagcgccggctggcgtacgtcggcgtcacgcgggcccgcgagcgcctctacgtc
tcccgggccgtggtccgctcggcgtggggcgcgccctcgcacaaccccgggtcgaggttc
ctcgacgagctgcccgtcgacctggtcgactggcgccgcaccgaggccgcccagacccgc
tgggggcgccccgacctggcgagcggctcggccgcccggctcggctcgcccaccgcggcc
ggccgccggaacttctccgccgccgccgtccgcgccgacgcggcggcccgggccaagccg
gcccgcgagatcccgagcctcgagcccggcgaccgggtgctgcacgactccttcggcatg
ggcacggtcgtcgcgctcgagggggtcgcggagaaggcggtcgcctcgatcgacttcggc
tccgagggcgtcaagcggctgctgttgcgctacgcgcccgtggagaagctgtag
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