Nocardioides sp. JS614: Noca_3810
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Entry
Noca_3810 CDS
T00443
Name
(GenBank) Exonuclease, RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
nca
Nocardioides sp. JS614
Pathway
nca03030
DNA replication
nca03430
Mismatch repair
nca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Noca_3810
03430 Mismatch repair
Noca_3810
03440 Homologous recombination
Noca_3810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nca03032
]
Noca_3810
03400 DNA repair and recombination proteins [BR:
nca03400
]
Noca_3810
Enzymes [BR:
nca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Noca_3810
DNA replication proteins [BR:
nca03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Noca_3810
DNA repair and recombination proteins [BR:
nca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Noca_3810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
PTCB-BRCT
DnaB_2
Motif
Other DBs
NCBI-ProteinID:
ABL83310
UniProt:
A1SNC5
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All DBs
Position
4028263..4029480
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AA seq
405 aa
AA seq
DB search
MTGYTIIDLETTGLFPQKHDRIVEIGLIEVSDSGAIEREWATLVNPQRDVGPTHIHGITA
RDVLDAPTFQEVAPYLIGSLAGRTLVAHNARFDTQFLDYEFERASVGTRPPTPSLCTMQL
SSSYLRGASRKLKDCCVAANVPHADEHTALGDARAVAGLLNYYLVNTDRPVPWSAVLEST
RRHWWPAPGPTPGRPRSVLRSATPREPAAWLDRITSTLPRNPNPMVEAYLDVLEQALLDG
YLSAHEENALVDLALSLGLHRDHLAAVHATYLDSMAIAAWADGMVTETELADLTSVATAL
GLPTDLVRVAIKRAKNVAAHATSEGGFKLCVGDQVVFTGELSVPRDQLIDLAQQAGLKHG
GVNKSTKLVVAADPDSQSGKAAKARSYGIPVVTEAAFARMLADLH
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgactggctacaccatcattgacctcgagaccaccgggctcttcccgcagaagcatgac
cgaatcgttgagatcggcctcattgaggtttcagactcaggagcgatcgagcgcgagtgg
gccaccctcgtcaacccgcagcgcgacgtgggcccgacgcacatccatggcattacggcg
cgcgacgtgctcgatgccccgaccttccaggaagttgctccatacctgatcggttcgctg
gccggtcgtactctggttgcgcacaacgcacgcttcgacacccagttcctcgactacgag
tttgagcgcgccagcgtcggaacgcgaccgcctacgccgtcactgtgcaccatgcagctg
tcgagttcgtatctacgaggcgcgtctcgaaagctgaaggactgctgcgttgccgcaaac
gttccgcacgcggacgagcacacggccctcggtgacgcccgagccgtcgctggtcttctc
aactattacctcgtcaataccgacagaccggtgccgtggtccgctgtcttggaatccaca
cggcgtcactggtggccggcccccgggccaacgccgggcaggccccgctcagtacttcgg
tctgccactcctcgagaaccggccgcctggctggaccgcatcacctcgaccctgccgcgt
aaccccaatcccatggtcgaggcgtacctcgacgttctggagcaggcactgctcgacgga
tacctgtccgcacacgaggagaacgccctcgttgacctcgcgctatctcttggcttgcac
cgcgaccatttggccgcggtccatgccacgtacctcgattcaatggcgatcgcggcctgg
gccgacggcatggtgaccgagaccgagctggcggatctcactagtgttgcgacggcgctc
ggcttaccgaccgacttggtgagggtggccatcaagagggccaagaacgtcgcggcgcac
gcgacgagcgagggcggtttcaagttgtgtgttggtgatcaggttgtgttcaccggcgag
ctgtctgtcccacgcgaccagttaatcgacttggcacaacaagctggcttgaagcatggc
ggagtcaataagagcaccaagctcgtcgtcgccgcagatcccgattcccagagtggcaaa
gccgcgaaggctcgcagctacggaatacccgtcgtcacggaggcagccttcgctcgtatg
ctcgccgacctccactag
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