Nocardioides sp. JS614: Noca_3813
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Entry
Noca_3813 CDS
T00443
Name
(GenBank) sigma-70 region 2 domain protein
KO
K03090
RNA polymerase sigma-B factor
Organism
nca
Nocardioides sp. JS614
Brite
KEGG Orthology (KO) [BR:
nca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nca03021
]
Noca_3813
Transcription machinery [BR:
nca03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Noca_3813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
MarR_2
HTH_Crp_2
MarR
KORA
Crp
HTH_3
HTH_24
Sigma70_ECF
GerE
HTH_31
Motif
Other DBs
NCBI-ProteinID:
ABL83313
UniProt:
A1SNC8
LinkDB
All DBs
Position
4033847..4034620
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AA seq
257 aa
AA seq
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MTAGIAPSRSDETIRLFTLRSAADPAERAEIEDQLIRLNMAVAVDATRRFRGRGIATDDL
EQVAYVGLVKAVKGFDPDRGHDFLSFAIPTIRGEVRRHFRDLGWTVRPPRSIQEAQTKII
ACEGELYQQLGRAPRPSEIAEHLGLDRDLVVEALGASGCFAPASLDAPAHEGDDDPIGRR
LGFTDEGFDVAEARAVLAPVLAKLSKRERIIVEMRFFRGCTQAQIGEAIGVTQMQVSRLL
TRLMARLREELNVTLAA
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgactgcagggattgcaccgagccgttccgacgagaccatccgtctcttcaccctccgc
tccgccgccgacccggcagagcgggccgagatcgaggaccagctgatccgcctgaacatg
gcggtggccgtggacgcgacccgtcgcttccgcgggcgcggcatcgccaccgacgacctc
gagcaggtcgcgtacgtcggcctggtcaaggcggtcaagggtttcgacccggaccgcggc
cacgacttcttgagcttcgcgatcccgaccatccgcggcgaggtccgccggcacttccgc
gacctcggctggacggtgcgcccgccccgctccatccaggaggcgcagaccaagatcatc
gcctgcgagggcgagctctaccagcagctcggccgggcgccgcgcccctcggagatcgcc
gagcacctcggcctcgaccgcgacctcgtggtggaggcgctcggcgccagcggctgcttc
gcgccggcctcgctcgacgcccccgcgcacgagggcgacgacgacccgatcgggcgccgc
ctgggcttcaccgacgagggcttcgacgtggccgaggcccgcgcggtgctcgcgccggtg
ctcgcgaagctctcgaagcgggagcggatcatcgtggagatgcgcttcttccgcggctgc
acccaggcccagatcggcgaggcgatcggcgtgacccagatgcaggtctcgcggctgctg
acgcggctgatggcccggctgcgcgaggagctgaacgtcacgctcgccgcctga
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integrated database retrieval system
