Nocardioides sp. JS614: Noca_3947
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Entry
Noca_3947 CDS
T00443
Name
(GenBank) helicase domain protein
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
nca
Nocardioides sp. JS614
Pathway
nca03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nca00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Noca_3947
09124 Replication and repair
03420 Nucleotide excision repair
Noca_3947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nca03021
]
Noca_3947
03400 DNA repair and recombination proteins [BR:
nca03400
]
Noca_3947
Enzymes [BR:
nca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Noca_3947
Transcription machinery [BR:
nca03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Noca_3947
DNA repair and recombination proteins [BR:
nca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Noca_3947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
ABL83444
UniProt:
A1SNQ9
LinkDB
All DBs
Position
4157563..4159203
Genome browser
AA seq
546 aa
AA seq
DB search
MNDGPLIVQSDKTLLLEVDHERAADCRKAIAPFAELERSPEHVHTYRLTPLGLWNARAAG
HDAEQVVDTLLEYSRYAVPHALLVDVAETMARYGRLRLEKHPVHGLVLVSTDRPVLEEVL
RAKKVAGMLGARIDEDTVVVHASERGNLKQALLKLGWPAEDYAGYVDGEAHPIALDETAW
HLRAYQREAAESFWHGGSGVVVLPCGAGKTLVGAAAMAEAQATTLILVTNTVSARQWKDE
LVRRTSLTPAEIGEYSGAVKEIRPVTIATYQVMTTKRKGVYPHLELLDARDWGLIVYDEV
HLLPAPIFRMTANLQARRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAP
ADCVEVRVTLPSGERLAYATAEPEERYRLASCTHHKIDVVESLVAAHPGQPTLVIGQYIE
QLDELALALDAPVIKGETKVAERQRLFDAFRHGEIGLLVVSKVANFSIDLPSAEVAIQVS
GSFGSRQEEAQRLGRLLRPKTEGRTAHFYTIVSRDTVDAEFAQNRQRFLAEQGYAYRIVD
AEDLPA
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgacggccccctgatcgtccagtcggacaagacgctgctgctcgaggtcgaccac
gagcgcgccgccgactgccgcaaggcgatcgcgccgttcgcggagctcgagcgctccccc
gagcacgtccacacctaccggctgacgccgctgggcctctggaacgcccgcgccgccggg
cacgacgccgagcaggtcgtcgacacgctgctggagtacagccgatacgccgtaccgcac
gcgttgctggtcgacgtcgccgagacgatggcgcgctacggccggctgaggctggagaag
caccccgtccacgggctggtgctggtcagcaccgaccggccggtgctcgaggaggtgctg
cgcgcgaagaaggtcgcggggatgctcggcgcgcgcatcgacgaggacacggtcgtcgtg
cacgcctccgagcggggcaacctcaagcaggcgctgctcaagctcggctggccggcggag
gactacgcggggtacgtcgacggcgaggcccacccgatcgcgctcgacgagaccgcgtgg
cacctgcgcgcctaccagcgcgaggcggccgagtcgttctggcacggcggctccggggtc
gtcgtcctcccctgcggggccggcaagacgctggtcggtgcggccgccatggccgaggcg
caggcgaccacgctgatcctggtcaccaacaccgtgtcggcgcggcagtggaaggacgag
ctggtccggcgtacctccctgacgccagccgagatcggcgagtactccggggcggtcaag
gagatccggccggtcaccatcgcgacgtaccaggtgatgacgaccaagcggaagggcgtc
tacccccatctcgagctgctcgacgcccgggactgggggctgatcgtctacgacgaggtg
cacctgctgccggcgccgatcttccggatgaccgcgaacctgcaggcccggcgccggctc
ggcctgaccgcgaccctggtgcgcgaggacggccgcgagggcgacgtgttctcgctgatc
gggccgaagcggtacgacgcgccctggaaggacatcgaggcgcagggctggatcgcccct
gccgactgcgtcgaggtgcgggtcacgctgccctcgggcgagcggctggcgtacgcgacc
gcggagcccgaggagcgctatcggctcgcgtcctgcacccaccacaagatcgacgtcgtc
gagtcactggtcgcagcccacccgggccagccgacgctggtgatcggtcagtacatcgag
cagctcgacgagctggctctggccctcgacgcgccggtgatcaagggcgagacgaaggtc
gccgagcggcagcggctgttcgacgccttccggcacggcgagatcgggctgctggtcgtc
tccaaggtcgcgaacttctccatcgacctgccctccgccgaggtcgcgatccaggtctcc
ggatccttcggctcccgccaggaggaggcccagcgcctgggccggctgctgcggcccaag
accgagggtcgcaccgcgcacttctacacgatcgtgtcccgcgacaccgtcgacgccgag
ttcgcccagaaccggcagcgcttcctcgccgagcagggctacgcctaccggatcgtggat
gcggaggacctgccggcgtag
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