Nocardioides sp. JS614: Noca_4002
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Entry
Noca_4002 CDS
T00443
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
nca
Nocardioides sp. JS614
Pathway
nca03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Noca_4002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nca03400
]
Noca_4002
Enzymes [BR:
nca01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Noca_4002
DNA repair and recombination proteins [BR:
nca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Noca_4002
Prokaryotic type
Noca_4002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABL83499
UniProt:
A1SNW4
LinkDB
All DBs
Position
4223973..4224665
Genome browser
AA seq
230 aa
AA seq
DB search
MSALAGLVDKGLMAPDWAQALAPVDEQIAAMGRFLREELAAGRTYQPTGEWVFRAFQRPL
ADVRVLIVGQDPYPNPEHPIGLSFAVRGDVWPLPPSLVNIYTELRDDLGLMPPRHGDLTA
WADQGVMLLNRSLTVRPGASNSHRGKGWEPITACAIEALVRRGGPLVAILWGSDARNLRP
MLGQIPVVESPHPSPLSAYRGFFGSRPFSRANRLLVEQGGRAVDWALPME
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcgctggcggggctggtcgacaaggggctgatggcgcccgactgggcgcaggcg
ctggcgccggtcgacgagcagatcgcggcgatgggccggttcctgcgcgaggagcttgcg
gcggggcggacctaccaaccgacgggcgagtgggtcttccgggcgttccagcgcccgctc
gccgacgtgcgcgtgctgatcgtcgggcaggacccctaccccaatcccgagcacccgatc
gggctgagcttcgcggtccgcggggacgtctggccgctgccgccgagcctggtgaacatc
tacaccgagctgcgcgacgacctcggcctgatgccgccgcgccacggcgacctgaccgcg
tgggcggaccaaggcgtcatgctgctcaaccggagcctcacggtgcggcccggcgcctcc
aacagccaccgcggcaagggctgggagccgatcaccgcgtgcgcgatcgaggcgctcgtc
cgccgaggcgggccgctcgtcgcgatcctctggggcagcgacgcgcgcaacctcaggccg
atgctcggccagatcccggtcgtggagtcaccgcacccgtcgcccttgtcggcgtaccgc
gggttcttcggctcgcggccgttcagccgggccaaccggctgctggtcgaacagggcggt
cgggccgtcgactgggccctccccatggaataa
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