Nocardioides sp. JS614: Noca_4082
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Entry
Noca_4082 CDS
T00443
Name
(GenBank) extracellular solute-binding protein, family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
nca
Nocardioides sp. JS614
Pathway
nca02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nca00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Noca_4082
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nca02000
]
Noca_4082
Transporters [BR:
nca02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Noca_4082
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Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ABL83579
LinkDB
All DBs
Position
complement(4310245..4311825)
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AA seq
526 aa
AA seq
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MTSTARSRSARARAGLVAVAAAAALLLAACGGGSGGNQSDGPETTKITDLVVDSGQEPDS
LDPFYRNTAEAQRFYRLAYSSILKWNEDGSLAPDLAAELPEVTDGGKTWTITLRDGVTFH
DGTPLTADDVVFTFEAAANPENGAVWLSSLSYMESVKAVDDTTVELKLTEPYAYMGSRLA
MIPILSDETPYKTNDTYATTENGSGPYVLEKLNRGDSIEMARFGDYFGDQPPFETITFKV
VPEDASRIARLLNGESHILPNVPTDQVELIKDRGANAAIVEKNVVRLFLYPSMNPDRPTS
NVDFRLAIAYAADRQRIVDQVYGGAGRPNSTYLTYGSLYHDEEVGMTFGSTPDIEAAKEH
LEASGYDTSRTLKIIAVNKPSVVRAMTILQANLKAIGVTATVESQEVAGFYSALISGEYD
LIAFDSPASTSAGFAPDYVNGGLNSKAANNFAKFNDPEMDRLLDTAMTAQTEEEQAAAWK
AVQERDVATQGNIQLVAAQVSEAWSKDLVGYEPSGLLWLNTVLDVK
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcacagcacgtagtcgctcggcacgagcccgggccgggctcgtagcggtcgcc
gcagcggccgccctcctcctcgccgcgtgcgggggaggctcgggtggcaaccagagcgac
gggccggagaccacgaagatcaccgacctggtggtcgacagcggtcaggagcccgactcc
ctggaccccttctaccgcaacaccgcggaggcgcaacgcttctaccgcctggcctacagc
agcatcctgaagtggaacgaggacggttcgctcgcccctgacctggcggcggagctgccc
gaggtgaccgacggcggcaagacgtggacgatcacgctccgcgacggagtcaccttccat
gacggcacaccgctgacggccgacgacgtggtcttcacgttcgaggccgcggcgaacccc
gagaacggtgccgtctggctctcctcgctgagctacatggaatccgtcaaggccgtcgac
gacaccacggtcgagctgaagctgaccgagccgtacgcctacatgggtagccggctcgcg
atgataccgatcctgtcggacgagacgccgtacaagaccaacgacacctatgccacaacc
gagaacggcagtggtccgtacgtgctggagaagctcaaccgcggcgactccatcgagatg
gcgcggttcggagactacttcggcgaccagccgcccttcgagaccatcaccttcaaggtc
gttccggaggacgcctcccggatcgctcgcctgctcaacggtgagtcccacatcctgccg
aacgtacccaccgaccaggtcgagctgatcaaggaccgcggcgcgaacgccgcgatcgtc
gagaagaacgtcgtccgcctgttcctctacccgtcgatgaaccccgaccggccgacctcg
aacgtcgacttccggcttgcgatcgcctatgcggccgaccggcagcggatcgtggaccag
gtgtacggcggcgcgggccgtccgaacagcacctacctgacctacggatcgctctaccac
gacgaggaggtcgggatgaccttcggttcgacgcccgacatcgaggccgcgaaggagcac
ctcgaggcgtcgggctacgacacgagccgcaccctgaagatcatcgcggtgaacaagccg
agcgtggtgagagcgatgacgatcctgcaggccaacctcaaggcgatcggcgtgaccgcc
accgtcgagtcgcaggaggtggccggcttctactcggcgctcatctccggggagtacgac
ctgatcgccttcgacagcccggcgtcgacgtcggcgggcttcgctcccgactacgtcaac
ggtggcctgaacagcaaggcggcgaacaacttcgcgaagttcaacgacccggagatggat
cggctcctcgacacggccatgacggcccagaccgaggaggagcaggccgcggcctggaag
gcggtccaggagcgtgacgtcgcgacgcagggcaacatccagctcgtcgcggctcaggtc
agcgaggcatggtccaaggacctggtgggctacgagccctccgggctcctgtggctgaac
accgtgctcgacgtcaagtag
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