Nocardioides sp. JS614: Noca_4680
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Entry
Noca_4680 CDS
T00443
Name
(GenBank) protein of unknown function DUF853, NPT hydrolase putative
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
nca
Nocardioides sp. JS614
Brite
KEGG Orthology (KO) [BR:
nca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nca03400
]
Noca_4680
DNA repair and recombination proteins [BR:
nca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
Noca_4680
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
FtsK_SpoIIIE
AAA_30
TrwB_AAD_bind
ResIII
AAA_10
T2SSE
Hydrolase
AAA_19
Zeta_toxin
AAA_7
nSTAND3
AAA_6
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
ABL84175
LinkDB
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Position
complement(4964017..4965606)
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AA seq
529 aa
AA seq
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MTADMTSPIAEQVAAGYRFEGPALELGALMLAADQLVDVPVRIPLAMLNRHGLVAGATGT
GKTRTLQLLVEQLSAQGVPVFAADIKGDLSGLAQPGTASEKLSARAATVGQEWAAAGFPV
EFYAIGGVGPGLPLRVTMSAFGPTLLSKVLGLNDTQESSLGLVFHYADRAGLPLLDLADL
RAVLAHLLSDEGKAELKALGGLSSATAGVILRELIGLEDQGGDVFFGEPEFESADLLQLA
PDGRGLVSLVELPQLQDRPAIFSTFLMWLLADLFHDLPEVGDVDKPRLVFFFDEAHLLFA
DASKAFLDQVAQTVRLIRSKGVGVFFVTQSPTDVPDAVLAQLGSRIQHQLRAHTPNDAKA
LKATVATYPTSGYDDLGQVITGLGIGEAVVTVMNERGAPTPVAWTRLRAPQSRMDPCDPD
VLTATVAASPRAAKYQAAIDRESAREILADRLEQGAAKQDREQAGAPGPDPDPAPRPVPV
PKPSTDKPSSRPPKDDSVVEQVVKSDAFKDFMRTAAREIARGMFKTGRR
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgactgcggacatgacgtcgccgatcgccgagcaggtcgccgcgggctaccgcttcgag
ggtccggccctcgagctcggcgccctgatgctcgccgccgaccagctggtcgacgtaccg
gtccggattccgttggcgatgctgaaccggcacggcctggtggccggggcgaccggcacc
ggcaagaccaggactcttcagctgctcgtcgagcagctcagcgcccagggcgtcccggtc
ttcgccgcggacatcaagggcgacctgtccgggctggcccagccgggcaccgcgagcgag
aagctcagcgcccgggccgccaccgtcggccaggagtgggcggccgccggcttccccgtg
gagttctacgcgatcggcggcgtcgggcccgggctgccgctgcgggtcaccatgagcgcg
ttcgggccgaccctgctgagcaaggtgctgggcctcaacgacacccaggagtccagcctg
gggctggtcttccactacgccgaccgggccggcctgccgctgctcgacctcgccgacctc
cgcgcggtgctcgcgcacctgctcagcgacgagggcaaggccgagctcaaggcgctgggt
gggctgtcgtcggcgaccgccggggtgatcctgcgcgagctgatcggcctggaggaccag
ggcggcgacgtgttcttcggcgagccggagttcgagtcggcggacctgctccagctcgcc
cccgacggccgcggcctcgtctcgctggtcgagctgccgcagctgcaggaccggccggcg
atcttctcgacgttcctgatgtggctgctcgccgacctgttccacgaccttcccgaggtc
ggggacgtggacaagccgaggctggtgttcttcttcgacgaggcgcacctgctcttcgcc
gacgcgtccaaggcgttcctcgaccaggtcgcccagaccgtgcggctgatccggtcgaag
ggggtcggggtgttcttcgtgacccagagccccaccgacgtgcccgacgcggtgctcgcc
cagctcggttcgcggatccagcaccagctgcgcgcgcacacccccaacgacgccaaggcg
ctcaaggcgaccgtggcgacctacccgaccagtgggtacgacgacctcgggcaggtcatc
accggcctcgggatcggcgaggccgtggtgaccgtgatgaacgagcgcggtgcgccgacg
ccggtggcctggacccgcctgcgggcgccccagtcgcggatggatccgtgcgatcccgac
gtcctcaccgccaccgtcgcggccagcccgcgggccgcgaagtaccaggccgcgatcgac
cgggagtccgcgcgcgagatcctcgccgaccggctcgagcagggtgccgcgaagcaggac
cgcgagcaggcgggcgcccccggcccggaccctgatccggcgccgcgcccggtgccggtc
ccgaagcccagcaccgacaagcccagcagcaggcccccgaaggacgacagcgtggtcgag
caggtcgtgaagtccgacgcgttcaaggacttcatgcgtaccgccgcccgcgagatcgcg
cgggggatgttcaagaccggccggcgctga
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