Nocardioides sp. JS614: Noca_4761
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Entry
Noca_4761 CDS
T00443
Name
(GenBank) putative DNA helicase II / ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nca
Nocardioides sp. JS614
Pathway
nca03420
Nucleotide excision repair
nca03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Noca_4761
03430 Mismatch repair
Noca_4761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nca03400
]
Noca_4761
Enzymes [BR:
nca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Noca_4761
DNA repair and recombination proteins [BR:
nca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Noca_4761
MMR (mismatch excision repair)
Other MMR factors
Noca_4761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
Viral_helicase1
AAA_19
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
ABL79347
UniProt:
A1SC12
LinkDB
All DBs
Position
pNOCA01:62813..63850
Genome browser
AA seq
345 aa
AA seq
DB search
MPSPKSRAIIAAAGAAKTQCILNEVIAHPERQALITTFTNENLAQIEARLRAACGGTLPP
HVTVMTWFTFLVNQCIRPYQRSVFGEPNVVGAFNFLGQRSRFTPKSDVHRYFLDSNRAVY
RDGAADLACELERRSSGKVTARLAAMFQDIFIDELQDLNGYDLELLERLFRSEVRVTAVG
DPRQHTFSTNQSIKNKAFKGEGLVGWIKDKEDVCELLIQNQCHRSNQTICDFADALFPHM
PATVSMNHSVTGHDGFFPLTRAEVLDYYEAHHPVVLRYDRNTDTLGLPARNFGLSKGSTY
DRVLIFPTKSWRKYFKDGDQSQVTSKEKFYVAVTRARFSVAHVID
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgcctaagagccgagcgatcatcgccgcggccggcgcagcgaagacccaatgc
atcttgaacgaggtcatcgctcaccccgagcgccaggcgctcatcacaaccttcaccaac
gagaacctcgcgcagatcgaagctcgcctgcgtgcagcgtgcggcggaacgctgcccccg
cacgtgaccgtgatgacatggttcaccttcttggtgaaccaatgcatacgtccgtatcaa
cggagcgtcttcggagaaccgaatgttgttggagcgttcaacttcctgggccagcgcagc
aggttcacgcccaagagcgatgtccatcgttacttcctcgactcaaaccgcgcggtgtac
cgagatggcgcagctgacctcgcctgcgaactcgaacgtcgaagctcgggcaaggtcacc
gctcgtctggcggcgatgttccaggacatcttcatagacgagctgcaggacctgaatggc
tacgacctggagttgcttgagcggctgttcagatccgaggtgcgcgtgacggccgtgggt
gaccctcgtcagcacacgttctccaccaaccagagcatcaagaacaaggcgttcaaaggc
gagggcctcgtgggatggatcaaggacaaggaagacgtctgcgagctgctcattcagaat
cagtgccaccgcagcaatcaaacgatctgcgacttcgcggacgccctgttcccccacatg
ccagcgaccgtctcgatgaaccacagcgtcactgggcatgatggattcttccctctgaca
cgagccgaggtactcgactactacgaggctcaccaccccgtcgtgctccgctacgatcgg
aacaccgacaccctcggcctacccgccaggaacttcggcctctccaaaggcagcacctac
gacagagttctcatcttcccaacgaagtcttggcgcaagtacttcaaggacggcgaccag
tcacaggtcacctcaaaggagaagttttacgtcgcagtcacgcgagcacgattcagcgtc
gcccacgtcatcgactag
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