Sciurus carolinensis (gray squirrel): 124958049
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Entry
124958049 CDS
T08117
Name
(RefSeq) latent-transforming growth factor beta-binding protein 3 isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
124958049
Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
124958049
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
hEGF
FXa_inhibition
EGF_3
Plasmod_Pvs28
EGF_TEN
EGF_2
Motif
Other DBs
NCBI-GeneID:
124958049
NCBI-ProteinID:
XP_047371675
LinkDB
All DBs
Position
11:10125950..10145906
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AA seq
1305 aa
AA seq
DB search
MPGPRGAAGGLAPAMRGAGAAGLLALLLLPLLGPGGGAEGGPAGERGAGGGGALARERFK
VVFAPVICKRTCLKGQCRDSCQQGSNMTLIGENGHSTDTLTGSGFRVVVCPLPCMNGGQC
SSRNQCLCPPDFTGRFCQVPAGGAGGGTGSSGPGLGRAGALSTGALPPLAPEGEPVASKH
AIYAVQVIADPPGPGEGPPAQHAAFLVPLGPGPGQTSAEVQAPPPVVNVRVHHPPEASVQ
VHRIEGSNAEGPAAAQLLLPHPKPPHPRPPTQKPLGRCFQDTLPKQPCGSNPLPGLTKQE
DCCGSIGTAWGQNKCHKCPQLQYTGVQKPGPLRGEVGADCPQGYKRLNSTHCQDINECAM
PGMCRHGDCLNNPGSYRCVCPPGHSLGPSRTQCIADKPEEKSLCFRLVSPEHQCQHPLTT
RLTRQLCCCSVGKAWGARCQRCPADGTAAFKEICPAGKGYHILTSHQTLTIQGESDFSLF
LHPDGPPKPQQLPESPSRAPSPEDTEEERGVTTDPPVSEERSVQQSHPTATTSPARPYPE
LMSRPSPPTMRWFLPDLPPSRSAVEIAPTQVTETDECRLNQNICGHGECVPGPSDYSCHC
NPGYRSHPQHRYCVDVNECEAEPCGPGRGICMNTGGSYNCHCNRGYRLHVGAGGRSCVDL
NECAKPHLCGDGGFCINFPGHYKCNCYPGYRLKASRPPVCEDIDECRDPSSCPDGKCENK
PGSFKCIACQPGYRSQGGGACRDINECSEGSPCSPGWCENLPGSFRCTCAQGYTPATDGR
SCVDVDECEAGDVCDNGICTNTPGSFQCQCLSGYHLSRDRSHCEDIDECDFPAACIGGDC
VNTNGSYRCLCPQGHRLVGGRKCQDIDECSQDPGLCLPHGACENLQGSYVCVCDEGFTPT
QDQHGCEEVEQPHHKKECYLNFDDTVFCDSVLATNVTQQECCCSLGAGWGDHCEIYPCPV
YSSAEFHSLCPDGKGYTQDNNIVNYGIPAHRDIDECVLFGAEICKEGKCVNTQPGYECYC
KQGFYYDGNLLECVDVDECLDESNCRNGVCENTRGGYRCACTPPAEYSPAQRQCLNPDEM
GEMDVDECQDPAACRPGRCVNLPGSYRCECRPPWVPGPSGRDCQLPESPAERAPERRDVC
WGQRGEDGMCAGPLAGPALTFDDCCCRQGRGWGAQCRPCPPRSAGSQCPTSQSESNSFWD
TSPLLLGKPPRDEDSSEEDSDECRCVSGRCVPRPGGAVCECPGGFQLDASRTRCVDIDEC
RELNQRGLLCKSERCVNTNGSFRCVCKAGFARSRQHGACVPQRRR
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggccccgaggggctgccggaggcctggcccctgcgatgcgcggggcgggggcg
gcggggctgctggcgctgctgctgctgccactactgggcccgggcggcggggccgagggg
gggccggccggcgagcggggcgccggcgggggcggggcgctggcccgcgagcgcttcaag
gtggtctttgcaccggtgatctgcaagcggacctgtctcaagggccagtgtcgggacagc
tgccagcagggctccaacatgacgctcatcggagagaacggccacagcaccgacacactc
acgggctccggcttccgcgtggtggtgtgccctctgccctgtatgaacggcggccagtgc
tcctcccgaaaccagtgcctgtgtcccccggacttcaccgggcgcttctgccaggtgccc
gctggaggagctggcgggggcaccggcagctcaggtccagggctgggccgggccggggcc
ctgtccacaggcgcgttaccgcccctggctcctgagggcgagcctgtggccagcaagcac
gccatctacgcagtgcaggtgatcgctgaccctcccgggccaggggaggggccccctgcg
cagcatgcggccttcctggtgcccctggggccagggccaggacagacctcagcagaagtg
caggccccgccccccgtggtgaatgtgcgggtccaccacccgccggaggcctcggtccaa
gtgcaccgcatcgaggggtccaacgccgaaggcccggctgcggcccagcttctgctgccg
caccccaagcccccgcacccacggccacccacccagaaacccctgggccgctgcttccag
gacacgctgcccaagcagccgtgtggcagcaaccccctgcctggcctcaccaagcaggaa
gactgctgcgggagcattggcaccgcctggggccaaaacaagtgccacaagtgcccacag
ctgcagtacacaggggtacagaagccagggcctctacgtggggaggtgggtgccgactgc
ccccagggctacaagaggctcaacagcacccattgccaggacatcaacgaatgcgcgatg
ccaggcatgtgtcgccatggtgactgcctcaacaaccctggctcctatcgctgcgtctgc
ccacctggccatagcttgggcccctctcgaacacagtgcattgccgacaagccagaggag
aagagcctatgtttccgcctggtgagccctgagcaccagtgccagcatcccctgaccaca
cgcctcacccgacagctctgctgctgcagtgtgggcaaggcctggggtgcgcggtgtcag
cgctgcccagcagatggcaccgctgccttcaaggagatctgcccagctgggaaggggtac
cacatcctcacctcccatcagaccctcaccatccagggtgaaagtgacttttcccttttt
ctgcaccctgatgggccacccaagccccaacagctccctgagagccccagtcgggcgcca
tcacctgaagacacagaggaagagagaggggtgaccaccgatccaccagtgagtgaggag
cggtctgtgcagcagagccaccccacagccaccacctctcctgcgcgaccctacccggag
ctgatgtcccgcccctcaccacctaccatgcgctggttcctgccggatttgcccccctct
cgcagtgcagtggaaatcgcccccactcaggtcacagagacagatgaatgccggctgaac
caaaacatctgtggccacggagagtgcgtcccgggcccctcggactattcctgtcactgc
aacccgggctaccggtcgcacccgcagcaccgctactgcgtagacgtgaacgaatgtgag
gcggagccctgcggccccggaagaggcatctgcatgaacaccggaggctcctacaactgc
cactgcaaccgaggctaccgcctgcacgtgggcgccggagggcgttcgtgcgtggacctg
aatgagtgcgcaaagccccatctgtgcggcgacggtggcttctgcatcaactttccgggt
cactataagtgcaactgctaccctggctaccggctcaaagcctcccgaccgcctgtgtgc
gaagacattgacgagtgtcgggaccctagctcctgcccggatggcaaatgcgagaacaaa
cccgggagcttcaagtgcattgcctgtcaacctggctatcgcagccaggggggcggggcc
tgccgcgacatcaacgagtgctcggagggcagtccctgttcgcccggctggtgcgagaac
ctcccgggttccttccggtgcacatgcgcccagggctacacgccggcgacggacggccgc
agttgcgtggatgtggatgaatgtgaagctggggacgtgtgtgacaatggcatctgtacc
aacacaccaggctccttccagtgtcagtgcctctctggctaccacctgtcaagggaccgg
agccactgtgaggacattgatgaatgtgacttcccggcggcctgcattgggggtgactgc
gtcaacaccaacggctcctaccgatgtctctgcccccaggggcatcgtctggtgggtggc
aggaagtgtcaagacatagatgagtgcagccaggaccctggcctgtgcctgccccatggg
gcctgtgagaacctgcagggctcctacgtttgtgtctgtgacgagggcttcacccctacc
caggaccagcatggctgtgaagaggtggagcagccccaccacaagaaggagtgctacctt
aacttcgatgatacggtgttctgcgacagcgtattggccaccaacgtcacccagcaggag
tgttgttgctcactgggggccggatggggagaccactgtgaaatctatccttgtccagtc
tacagctcagctgagtttcacagcctttgcccggacggaaagggctacacgcaggacaac
aacattgtcaactacggcatccccgcccaccgtgacatcgacgagtgcgtgttgttcgga
gcggagatctgcaaggagggcaagtgtgtgaacacacagcctggctacgagtgctactgc
aagcagggcttctactacgacgggaacctgctggagtgcgtggacgtagacgaatgcctg
gacgagtccaactgccggaacggagtgtgtgagaacacgcgcggcggctaccgctgcgcc
tgcacgcccccggcggagtacagcccagcgcagcgacagtgtctgaaccctgacgagatg
ggtgagatggacgtggacgagtgccaggacccggcagcctgccgccctggccgctgcgtc
aacctaccgggctcctaccgctgcgagtgtcgcccgccctgggtgcccgggccgtccggc
cgtgactgccagctccccgagagcccggcggaacgtgccccggagcggcgcgacgtttgc
tggggacagcgtggagaggatggcatgtgtgcgggccccttggccgggcctgcccttact
ttcgatgactgctgctgtcgccagggccgcggctggggcgcccagtgccgcccgtgcccg
ccgcgtagcgccgggtcccagtgtccgacatcgcagagtgagagtaattccttctgggac
acgagccccctgctgttggggaagcccccgcgagacgaggacagttcggaggaggattcg
gacgagtgccgctgtgtgagcggccggtgcgtgccgcggccgggaggcgcggtgtgcgaa
tgtcccggtggcttccaactggacgcctctcgcacgcgctgcgttgacatcgatgagtgc
cgagaactgaaccagcgcgggcttctgtgcaagagcgagcgctgcgtaaacacgaacggc
tccttccgctgcgtctgcaaagccggcttcgcgcgcagccgccagcatggggcctgtgtg
ccccagcgccgccgttga
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