Sciurus carolinensis (gray squirrel): 124958056
Help
Entry
124958056 CDS
T08117
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04710
Circadian rhythm
ncar04728
Dopaminergic synapse
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09156 Nervous system
04728 Dopaminergic synapse
124958056
09159 Environmental adaptation
04710 Circadian rhythm
124958056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124958056
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
124958056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
bHLH_INO2
PAS_2
bHLH_NCOA
bHLH_NPAS4
PAS_8
bHLH_SAC51
Motif
Other DBs
NCBI-GeneID:
124958056
NCBI-ProteinID:
XP_047371690
LinkDB
All DBs
Position
11:complement(63477616..63577022)
Genome browser
AA seq
633 aa
AA seq
DB search
MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQLDDFSFEESMDTD
KDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLT
VLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVS
ESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDIT
PGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPP
TKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFV
DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTRDKITTNCYKFKIKDGSF
ITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGG
PKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDAS
SPGGKKILNGGTPDIPSSGLLPGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSP
SNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccagagaatggacatttcctccacaatcagtgacttcatgtccccgggcccc
actgacctgctctccagctcccttggtaccagtggtgtggattgcaaccgcaagcggaaa
ggcagctccactgattaccaacttgatgacttttcttttgaagaaagcatggacacagac
aaagatgaccctcatggaaggttagaatatacagaacatcagggaaggatcaagaatgca
agggaagctcacagtcagattgaaaagaggcgtcgagataaaatgaacagttttattgat
gaattggcttctttggtaccaacatgcaacgcaatgtccaggaaattagataaactgacc
gtgctaaggatggctgttcagcacatgaaaacattaagaggtgccaccaatccatacaca
gaagcaaactataaaccaacttttctgtcagatgatgaattgaaacacctcattctcagg
gcagcagatggatttttgtttgtcgtaggatgtgaccgagggaagatactctttgtctca
gagtctgtcttcaagatcctcaactacagccagaacgatctgattggtcagagtctgttt
gactacctgcaccctaaagatatcgccaaagtcaaggagcagctctcctcctctgacact
gcaccccgggagcggctcatagatgcaaaaactggacttccagttaaaacagatataacc
cctgggccgtctcgattatgttctggagcacgacgttctttcttctgtaggatgaagtgt
aacaggccttcagtgaaggtcgaagacaaggacttcccctccacctgttcaaagaaaaaa
gcagatcgaaaaagcttctgcacaatccacagcacaggctatttgaaaagctggccaccc
acaaagatggggttggatgaagacaatgaaccagacaacgaggggtgtaacctcagctgc
cttgttgcaattggacgactgcattctcatgtggttccccaaccagtgaacggggaaatc
agggtgaaatccatggagtatgtttctcggcacgcaatagatgggaagtttgtcttcgta
gaccagagggcaacagctattctggcatatttaccacaagaactcctaggcacatcatgt
tatgaatattttcatcaagatgacataggacatcttgcagaatgtcataggcaagtttta
cagacaagagacaagattacgactaattgctataagtttaaaatcaaagatggttctttc
atcacactacgaagtcgatggttcagtttcatgaacccttggaccaaggaagtagaatac
atcgtctcaaccaacactgttgtcttagccaacgtcctggaaggcggggacccaactttc
ccgcagctcacagcgtccccccacagcatggacagcatgctgccctctggagaaggtggc
ccaaagaggactcatcccactgttccagggattccagggggaaccagggctggggcagga
aaaataggtcgaatgattgctgaggaaatcatggaaatccacaggataagagggtcatca
ccttccagctgtggctccagcccattgaacattacaagtacgcctccccctgatgcctcc
tctccaggaggcaagaagattttaaacggagggactccagacattccttccagtggccta
ctgccaggacaggctcaggagaacccaggttatccatattctgatagttcttctattctt
ggtgagaacccccacataggtatagacatgatagacaacgaccaaggatcaagtagtccc
agtaatgatgaagcagcaatggctgtcatcatgagcctcttggaagcagatgctgggctg
ggtggccctgttgactttagcgacttgccatggccgctgtaa
DBGET
integrated database retrieval system
