Sciurus carolinensis (gray squirrel): 124958098
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Entry
124958098 CDS
T08117
Name
(RefSeq) neuronal PAS domain-containing protein 4
KO
K26457
neuronal PAS domain-containing protein 4
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124958098
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
124958098
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GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
PAS
HLH
Motif
Other DBs
NCBI-GeneID:
124958098
NCBI-ProteinID:
XP_047371751
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Position
11:complement(9348857..9365087)
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AA seq
805 aa
AA seq
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MYRSTKGASKARRDQINAEIRNLKELLPLAEADKVRLSYLHIMSLACIYTRKGVFFAGGA
PLAGPTGLLSAQELEDIVAALPGFLLVFTAEGKLLYLSESVSEHLGHSMVDLVAQGDSIY
DIIDPADHLTVRQQLTLPSALDTDRLFRCRFNTSKSLRRQSAGNKLVLIRGRFHAHPPGA
YWAGNPVFTAFCAPLEPRPRPGPGPGPGPGPASLFLAMFQSRHAKDLALLDISESVLIYL
GFERSELLCKSWYGLLHPEDLAHASAQHYRLLAESGDIQAEMVVRLQAKPGGWAWIYCLL
YSEGPEGPITANNYPISDSEAWSLRQQLNSEDTQAAYVLGTSTILPSLPSFPENILSQEQ
CSNPLFTQPLGAPRSTGFPSTPELGVVSASEELPRPPKELDFSYLPFPSGPESSLHTDLS
KDLVCTPPYTPHQPGGCAFLFSLHEPFQTHLPAPSSSLQEQLTPSTATFSDQLTPSSATF
PDPLTSPLPGQLTETSVRSYEDQLTPCTSTFPDQLLPSTAAFPEPLSSPAHEQLTPPSTA
FQASLNSPSQTFPEQLSPNPTKTYFAQEGCSFLYEKLPPSPSSPGNGDCTLLALAQLRGP
LSVDVPLVPEGLLTPEASPVKQSFFHYSEKEQNEIDRLIQQISQLAQGMDRPFSAEAGTG
GLESLGGLEPLDSNLSLSGAGPPVLSLDLKPWKCQELDFLADPDNIFLEETPVEDIFMDL
STPDPNGEWDSGDPEAEGPEGAPSPCNNLSPEDHSFLEDLATYETAFETGVSAFPYDGFT
DELHQLQSQAQDSFHEDGSGGEPTF
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgctccaccaagggcgcctccaaggcgcgccgcgaccagatcaacgcggagatc
cggaatctcaaggagctgctacctctggctgaagcggacaaagtccggctgtcctatctg
cacattatgagtcttgcctgcatctacactcgaaagggcgtcttcttcgctggaggtgct
cctctggccggccccacggggcttctctcagctcaagagcttgaagacatcgtggcagca
ctacctggatttctgcttgttttcacagctgaggggaagttgctatacctgtctgagagt
gtgagcgagcacctgggccactctatggtggacctggttgcccagggtgacagtatctac
gacatcattgacccagctgaccatctcactgtgcgtcagcaactcaccctgccctctgct
ctggacactgatcgtctcttccgttgtcgtttcaacacctccaaatcccttcggcgccag
agtgcaggcaacaaactggtgcttattcgaggccgattccatgctcacccacctggggcc
tactgggcaggaaaccctgtgttcactgctttctgtgccccactggagccaagaccccgc
cctggacctggccctggacctggccctggccctgcctcactcttcctggccatgttccag
agccggcatgctaaggacctagccctactggacatatctgagagtgtcctaatttacctg
ggctttgagcgcagtgaactgctctgtaaatcatggtatggactgctgcaccctgaggac
ctggcccatgcttctgctcaacactaccgcctattggctgagagtggagatatccaggca
gagatggtggtgagactgcaggctaagcctggaggctgggcatggatttactgcctgtta
tactcagaaggtcctgaaggtcctatcactgccaataactacccaatcagtgactcggaa
gcctggagcctccgccagcaactgaactctgaagacacccaggcagcttatgtcctgggc
acctcgaccatactgccctcattgccctcatttcctgagaacatcctctcccaggagcag
tgttcgaacccactctttacccaacccctcggggctcccagaagcactggtttccccagt
actcctgaactaggtgttgtctcagcatcagaagagcttccccgaccacctaaagagctg
gatttcagttacctgccattcccttctgggcctgagtcttctctccatacagacctgagc
aaggatcttgtgtgtaccccaccctacacaccccaccagccaggaggctgtgccttcctc
ttcagcctccatgagcccttccagacccatttgcctgccccatctagctcactccaagaa
cagctgaccccaagcactgcaaccttctctgatcagttgacacccagcagtgcaaccttc
ccagatccactaaccagcccactaccaggccagttgaccgaaacctccgtcagaagctat
gaagaccaactgactccctgcacctccaccttcccagaccagctgcttcccagcactgcc
gccttcccagaacctctgagcagccctgcccacgaacagctgactcctcccagcacagca
ttccaagcatctctgaacagccccagccaaactttcccagagcaactgagccccaatccc
accaagacttacttcgcccaggagggatgcagttttctctatgagaagttgcccccaagt
cctagcagccctggtaatggggactgcacactcctggccctggcccagctccggggcccc
ctgtctgtggatgtccccctggtgcctgaaggcctgctcacacctgaggcctctccagtc
aagcagagtttcttccactattctgagaaggagcaaaatgagatagaccgtctcatccag
cagatcagccaattggctcagggcatggacaggcccttctcagctgaggctggcactggg
ggactggagtcacttggaggactggaacccctggactccaacctatccctgtcaggggct
ggcccccctgtgctgagcctggacctgaaaccctggaaatgccaggagctggactttctg
gctgaccctgataacatattcctggaagagacgcccgtggaagacatcttcatggatctc
tctactccagaccccaatggggaatgggattcaggggatcctgaggcagagggcccagaa
ggggccccatcgccttgcaacaacctgtccccagaagaccacagcttcctggaggacctg
gccacctacgaaaccgcctttgagacaggtgtctcagcattcccctacgatgggtttact
gatgagttgcatcaactccagagccaagctcaagacagcttccatgaagatggaagtgga
ggggaaccaacgttttga
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